RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PIF1Q9H611 641 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 DYNLRB1Q9NP97 96 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 TPSG1Q9NRR2 321 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 RLIMQ9NVW2 624 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 TMEM160Q9NX00 188 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 SELENONQ9NZV5 590 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 RASD1Q9Y272 281 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 ZNF443Q9Y2A4 671 aaPredicted RBP6.78□□□□□ -1.32
VPS50-203ENST00000436177 NUP214P35658 2090 aaPredicted RBP6.77□□□□□ -1.33
VPS50-203ENST00000436177 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 LOC390937A0A1W2PQ73 354 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 CDHR4A6H8M9 788 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 B9A039 149 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 PDLIM1O00151 329 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 SDHDO14521 159 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 FRS3O43559 492 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 SLC22A3O75751 556 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 PDE5AO76074 875 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 LY6HO94772 140 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 KITP10721 976 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 ZNF43P17038 809 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 RPS4Y1P22090 263 aaKnown RBP6.77□□□□□ -1.33
VPS50-203ENST00000436177 EPHA3P29320 983 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 NTF4P34130 210 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 CDKN2CP42773 168 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 CAPZA2P47755 286 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 STX1BP61266 288 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 SLC25A3Q00325 362 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 BST1Q10588 318 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 COX20Q5RI15 118 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 RNF220Q5VTB9 566 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 AP1ARQ63HQ0 302 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 ANKRD16Q6P6B7 361 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 ZNF836Q6ZNA1 936 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 C8orf86Q6ZUL3 223 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 VRK2Q86Y07 508 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 KRT73Q86Y46 540 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 PHC2Q8IXK0 858 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 GPR137CQ8N3F9 429 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 MREGQ8N565 214 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 OR4F15Q8NGB8 312 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 OR1K1Q8NGR3 316 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 MGARPQ8TDB4 240 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 ZNF385AQ96PM9 386 aaKnown RBP6.77□□□□□ -1.33
VPS50-203ENST00000436177 RAB1BQ9H0U4 201 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 RAD21L1Q9H4I0 556 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 WDR55Q9H6Y2 383 aaPredicted RBP6.77□□□□□ -1.33
VPS50-203ENST00000436177 CA10Q9NS85 328 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 PNPOQ9NVS9 261 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 NKIRAS1Q9NYS0 192 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.77□□□□□ -1.33
VPS50-203ENST00000436177 HAO1Q9UJM8 370 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 SLC13A4Q9UKG4 626 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 RCE1Q9Y256 329 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 IFT52Q9Y366 437 aa6.77□□□□□ -1.33
VPS50-203ENST00000436177 V9GYY5 206 aaPredicted RBP6.77□□□□□ -1.33
VPS50-203ENST00000436177 A0A096LNT2 108 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 A0A096LPE4 126 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 IGHV1-18A0A0C4DH31 117 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 A0A0G2JPF8 293 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 A0A1W2PPZ6 126 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 PRAMEF27A3QJZ7 478 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 HNRNPCL2B2RXH8 293 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 HNRNPCL3B7ZW38 293 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 M0R082 166 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 UBDO15205 165 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 HNRNPCL1O60812 293 aaKnown RBP6.76□□□□□ -1.33
VPS50-203ENST00000436177 SLC43A1O75387 559 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ALDOCP09972 364 aaKnown RBP6.76□□□□□ -1.33
VPS50-203ENST00000436177 TFPTP0C1Z6 253 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 OR4A8P0C604 315 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 HNRNPCL4P0DMR1 293 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 IGHV4-31P0DP07 118 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ETFAP13804 333 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 LSP1P33241 339 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 NR4A2P43354 598 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 SELENOPP49908 381 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 IDH3GP51553 393 aaPredicted RBP6.76□□□□□ -1.33
VPS50-203ENST00000436177 CLDN17P56750 224 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ROR2Q01974 943 aaKnown RBP6.76□□□□□ -1.33
VPS50-203ENST00000436177 NAAAQ02083 359 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 PLAURQ03405 335 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 NPRL3Q12980 569 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 BNIP2Q12982 314 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 PDCD4Q53EL6 469 aaKnown RBP6.76□□□□□ -1.33
VPS50-203ENST00000436177 ZNF311Q5JNZ3 666 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 RPS26P11Q5JNZ5 115 aaPredicted RBP6.76□□□□□ -1.33
VPS50-203ENST00000436177 LIPNQ5VXI9 398 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 C5orf46Q6UWT4 87 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 MSANTD1Q6ZTZ1 278 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ANKS4BQ8N8V4 417 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 PIK3C3Q8NEB9 887 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ZNF417Q8TAU3 575 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 STK35Q8TDR2 534 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 SLC38A5Q8WUX1 472 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 TMEM19Q96HH6 336 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 TEX37Q96LM6 180 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ANKRD27Q96NW4 1050 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 SORCS2Q96PQ0 1159 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms