RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 PRAMEF7Q5VXH5 474 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 WBP2NLQ6ICG8 309 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 NUDCD3Q8IVD9 361 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 CLIP4Q8N3C7 705 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 CADM2Q8N3J6 435 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 ZFAND2BQ8WV99 257 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 PKNOX2Q96KN3 472 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 PTDSS2Q9BVG9 487 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 RACGAP1Q9H0H5 632 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 TPK1Q9H3S4 243 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 GPR35Q9HC97 309 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 SEC14L4Q9UDX3 406 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 PRDM4Q9UKN5 801 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 PCDHB14Q9Y5E9 798 aa11.72□□□□□ -0.53
LINC00028-201ENST00000435497 DSPPQ9NZW4 1301 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 VSTM5A8MXK1 200 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 B4DSR2 109 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 FAM157AC9JC47 383 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 E9PBE3 544 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 WNT9BO14905 357 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 ERCC1P07992 297 aaPredicted RBP11.71□□□□□ -0.53
LINC00028-201ENST00000435497 PNMTP11086 282 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 COMPP49747 757 aaPredicted RBP11.71□□□□□ -0.53
LINC00028-201ENST00000435497 MVDP53602 400 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 CLNS1AP54105 237 aaKnown RBP11.71□□□□□ -0.53
LINC00028-201ENST00000435497 SH3BGRP55822 239 aaPredicted RBP11.71□□□□□ -0.53
LINC00028-201ENST00000435497 NME5P56597 212 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 IL1RL1Q01638 556 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 NPRL3Q12980 569 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 DAG1Q14118 895 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 DPY19L1Q2PZI1 675 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 UGT2A3Q6UWM9 527 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 ZNF621Q6ZSS3 439 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 MDP1Q86V88 176 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 PEX5LQ8IYB4 626 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 RIBC1Q8N443 379 aaPredicted RBP11.71□□□□□ -0.53
LINC00028-201ENST00000435497 ANKK1Q8NFD2 765 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 OR52P1PQ8NH57 321 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 CLDND2Q8NHS1 167 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 MFSD8Q8NHS3 518 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 PNPT1Q8TCS8 783 aaKnown RBP11.71□□□□□ -0.53
LINC00028-201ENST00000435497 STK35Q8TDR2 534 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 SLC25A36Q96CQ1 311 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 SORT1Q99523 831 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 MRPL37Q9BZE1 423 aaKnown RBP11.71□□□□□ -0.53
LINC00028-201ENST00000435497 NOX3Q9HBY0 568 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 MOV10Q9HCE1 1003 aaKnown RBP11.71□□□□□ -0.53
LINC00028-201ENST00000435497 DYNLRB1Q9NP97 96 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 SLC6A13Q9NSD5 602 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 B3GNT2Q9NY97 397 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 B3GAT1Q9P2W7 334 aa11.71□□□□□ -0.53
LINC00028-201ENST00000435497 MEGF8Q7Z7M0 2845 aa11.71□□□□□ -0.54
LINC00028-201ENST00000435497 WDR91A4D1P6 747 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 KCNAB3O43448 404 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 HPXP02790 462 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 ALDOCP09972 364 aaKnown RBP11.7□□□□□ -0.54
LINC00028-201ENST00000435497 MYZAPP0CAP1 466 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 LBPP18428 481 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 NR4A1P22736 598 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 ARR3P36575 388 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 ABCE1P61221 599 aaKnown RBP11.7□□□□□ -0.54
LINC00028-201ENST00000435497 TXNL4AP83876 142 aaKnown RBP11.7□□□□□ -0.54
LINC00028-201ENST00000435497 POU3F1Q03052 451 aaPredicted RBP11.7□□□□□ -0.54
LINC00028-201ENST00000435497 SNTB2Q13425 540 aaKnown RBP11.7□□□□□ -0.54
LINC00028-201ENST00000435497 CEACAM16Q2WEN9 425 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 PHYHD1Q5SRE7 291 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 KRT80Q6KB66 452 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 GLCCI1Q86VQ1 547 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 TRIM44Q96DX7 344 aaPredicted RBP11.7□□□□□ -0.54
LINC00028-201ENST00000435497 KTI12Q96EK9 354 aaPredicted RBP11.7□□□□□ -0.54
LINC00028-201ENST00000435497 ZNF75AQ96N20 296 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 OXGR1Q96P68 337 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 PANX1Q96RD7 426 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 CRLF2Q9HC73 371 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 HIF1ANQ9NWT6 349 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 RCE1Q9Y256 329 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 RAP2CQ9Y3L5 183 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 CMAHPQ9Y471 501 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 SPEF1Q9Y4P9 236 aa11.7□□□□□ -0.54
LINC00028-201ENST00000435497 TMEM89A2RUT3 159 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 SYNGR3O43761 229 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 FZD7O75084 574 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 SLC43A1O75387 559 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 RGS9O75916 674 aaPredicted RBP11.69□□□□□ -0.54
LINC00028-201ENST00000435497 SEC14L2O76054 403 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 SERPINE1P05121 402 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 ZNF43P17038 809 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 TCN1P20061 433 aaPredicted RBP11.69□□□□□ -0.54
LINC00028-201ENST00000435497 PCMT1P22061 227 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 RPS5P46782 204 aaKnown RBP11.69□□□□□ -0.54
LINC00028-201ENST00000435497 EVX1P49640 407 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 RPL14P50914 215 aaKnown RBP11.69□□□□□ -0.54
LINC00028-201ENST00000435497 SEC24CP53992 1094 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 COPZ1P61923 177 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 CHI3L2Q15782 390 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 LIN52Q52LA3 116 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 ATG16L1Q676U5 607 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 C1orf229Q6ZS94 237 aaPredicted RBP11.69□□□□□ -0.54
LINC00028-201ENST00000435497 SERPINA11Q86U17 422 aa11.69□□□□□ -0.54
LINC00028-201ENST00000435497 TRIML2Q8N7C3 387 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms