RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 ROR2Q01974 943 aaKnown RBP11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 CARTPTQ16568 116 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 ZSWIM7Q19AV6 140 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 SWI5Q1ZZU3 235 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 GLIPR1L2Q4G1C9 344 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 PAGE3Q5JUK9 113 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 ANKRD16Q6P6B7 361 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 FUNDC1Q8IVP5 155 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 GOLGA6L1Q8N7Z2 621 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 BBS10Q8TAM1 723 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 TAAR8Q969N4 342 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 ZNF837Q96EG3 531 aaPredicted RBP11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 KCNK17Q96T54 332 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 VRK1Q99986 396 aaPredicted RBP11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 KCNS3Q9BQ31 491 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 PIF1Q9H611 641 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 BCL2L10Q9HD36 194 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 SLCO1B3Q9NPD5 702 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 TCF7L2Q9NQB0 619 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 THUMPD1Q9NXG2 353 aaKnown RBP11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 CCDC167Q9P0B6 97 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 B3GAT1Q9P2W7 334 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 RPS6KB2Q9UBS0 482 aa11.4□□□□□ -0.58
CDCA4P4-201ENST00000435216 IGKV1D-42A0A075B6H8 117 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 A0A1B0GWA3 101 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 ZNF503-AS2A6NEH8 195 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 RNF212BA8MTL3 300 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 M0R082 166 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 POLR3GO15318 223 aaPredicted RBP11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 TPST1O60507 370 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 F12P00748 615 aaPredicted RBP11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 CRYAAP02489 173 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 CECR9P0C854 216 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 BMP2P12643 396 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 ZNF43P17038 809 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 GRPRP30550 384 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 CALCRP30988 508 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 IDH3AP50213 366 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 STX1BP61266 288 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 NAAAQ02083 359 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 FADDQ13158 208 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 GGTLC2Q14390 218 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 BEND6Q5SZJ8 279 aaPredicted RBP11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 SLC46A3Q7Z3Q1 461 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 ARIH2OSQ8N7S6 290 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 SPATA3Q8NHX4 192 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 ZNF417Q8TAU3 575 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 RNF217Q8TC41 542 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 BOD1Q96IK1 185 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 ZNF587Q96SQ5 575 aaPredicted RBP11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 REPIN1Q9BWE0 567 aaKnown RBP11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 RAD21L1Q9H4I0 556 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 IKZF5Q9H5V7 419 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 OBP2BQ9NPH6 170 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 CA10Q9NS85 328 aa11.39□□□□□ -0.59
CDCA4P4-201ENST00000435216 STAB1Q9NY15 2570 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 ARPC4-TTLL3A0A0A6YYG9 625 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 ZNF432O94892 652 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 OR4A8P0C604 315 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 ARAFP10398 606 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 USF1P22415 310 aaPredicted RBP11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 AQP1P29972 269 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 PRKAR1BP31321 381 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 SERPINF1P36955 418 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 IDH3GP51553 393 aaPredicted RBP11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 SNRPD2P62316 118 aaKnown RBP11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 C1DQ13901 141 aaKnown RBP11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 ADIPOQQ15848 244 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 CEACAM16Q2WEN9 425 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 ALG10BQ5I7T1 473 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 PHYHD1Q5SRE7 291 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 LRIF1Q5T3J3 769 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 GCNT6Q5T4J0 391 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 CARD17Q5XLA6 110 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 PODNL1Q6PEZ8 512 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 BLOC1S3Q6QNY0 202 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 PHC2Q8IXK0 858 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 SPDL1Q96EA4 605 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 OXGR1Q96P68 337 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 WFDC6Q9BQY6 131 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 KATNB1Q9BVA0 655 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 LINC00470Q9BZP3 86 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 CRLF2Q9HC73 371 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 GPR35Q9HC97 309 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 VAPAQ9P0L0 249 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
CDCA4P4-201ENST00000435216 OR6C65A6NJZ3 312 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 LRRN3E7EW58 273 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 AIM2O14862 343 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 SLC43A1O75387 559 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 HPRP00739 348 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 IFNA2P01563 188 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 HLA-DOBP13765 273 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 ETS2P15036 469 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 CAPZA2P47755 286 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 PDLIM4P50479 330 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 AQP5P55064 265 aa11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 LSM11P83369 360 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDCA4P4-201ENST00000435216 CDK6Q00534 326 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms