RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 GSNP06396 782 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 ALDOCP09972 364 aaKnown RBP12.9□□□□□ -0.34
PRKDC-203ENST00000432581 CBR1P16152 277 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 ZNF43P17038 809 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 APEX1P27695 318 aaKnown RBP12.9□□□□□ -0.34
PRKDC-203ENST00000432581 GTF2E2P29084 291 aaKnown RBP12.9□□□□□ -0.34
PRKDC-203ENST00000432581 IL12AP29459 219 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 SRP14P37108 136 aaKnown RBP12.9□□□□□ -0.34
PRKDC-203ENST00000432581 HGFACQ04756 655 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 MAPK11Q15759 364 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 CCDC36Q8IYA8 594 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 IL17RDQ8NFM7 739 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 DOK1Q99704 481 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 DYNLRB1Q9NP97 96 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 ZNF232Q9UNY5 417 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 ZNF443Q9Y2A4 671 aaPredicted RBP12.9□□□□□ -0.34
PRKDC-203ENST00000432581 LILRA1O75019 489 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 SLC43A1O75387 559 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 BCHEP06276 602 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 PNMTP11086 282 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 PCMT1P22061 227 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 THBS4P35443 961 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 ARR3P36575 388 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 CLDN17P56750 224 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 VSNL1P62760 191 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
PRKDC-203ENST00000432581 SPATA21Q7Z572 469 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 ZNF786Q8N393 782 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 CLIP4Q8N3C7 705 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 SVOPLQ8N434 492 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 SPATA9Q9BWV2 254 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 SEC61A2Q9H9S3 476 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 THUMPD1Q9NXG2 353 aaKnown RBP12.89□□□□□ -0.35
PRKDC-203ENST00000432581 TMEFF2Q9UIK5 374 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-203ENST00000432581 IFT52Q9Y366 437 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 GPR45Q9Y5Y3 372 aa12.89□□□□□ -0.35
PRKDC-203ENST00000432581 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 TMEM247A6NEH6 219 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 FTCDNL1E5RQL4 147 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 ZNF432O94892 652 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 IL6P05231 212 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 CELA3BP08861 270 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 PRG2P13727 222 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 ETFAP13804 333 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 BGNP21810 368 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 CRATP43155 626 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 MVDP53602 400 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 DSTNP60981 165 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 POU3F1Q03052 451 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-203ENST00000432581 STX3Q13277 289 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 RIN1Q13671 783 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 KRT71Q3SY84 523 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 GPR137CQ8N3F9 429 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 UBASH3BQ8TF42 649 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 AENQ8WTP8 325 aaKnown RBP12.88□□□□□ -0.35
PRKDC-203ENST00000432581 SLC38A5Q8WUX1 472 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 CKAP2Q8WWK9 683 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 SLC35B4Q969S0 331 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 SLC25A36Q96CQ1 311 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 C1orf159Q96HA4 380 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 OXGR1Q96P68 337 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 SNX18Q96RF0 628 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 PTDSS2Q9BVG9 487 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 GPR35Q9HC97 309 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
PRKDC-203ENST00000432581 A0A0G2JPF8 293 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 TMEM129A0AVI4 362 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 HNRNPCL2B2RXH8 293 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 HNRNPCL3B7ZW38 293 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 SDHDO14521 159 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 AIM2O14862 343 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
PRKDC-203ENST00000432581 AKAP8O43823 692 aaKnown RBP12.87□□□□□ -0.35
PRKDC-203ENST00000432581 OR2T1O43869 369 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 HNRNPCL1O60812 293 aaKnown RBP12.87□□□□□ -0.35
PRKDC-203ENST00000432581 FZD7O75084 574 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 ZCCHC18P0CG32 403 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 HNRNPCL4P0DMR1 293 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 IFNGR1P15260 489 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 IL2RGP31785 369 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 RPS5P46782 204 aaKnown RBP12.87□□□□□ -0.35
PRKDC-203ENST00000432581 CDH15P55291 814 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 NPRL3Q12980 569 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 C1DQ13901 141 aaKnown RBP12.87□□□□□ -0.35
PRKDC-203ENST00000432581 DAG1Q14118 895 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 ADRM1Q16186 407 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 ATG16L1Q676U5 607 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 C5orf46Q6UWT4 87 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 SERPINA11Q86U17 422 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 MYPOPQ86VE0 399 aaPredicted RBP12.87□□□□□ -0.35
PRKDC-203ENST00000432581 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
PRKDC-203ENST00000432581 ZCCHC24Q8N2G6 241 aaKnown RBP12.87□□□□□ -0.35
PRKDC-203ENST00000432581 KDM8Q8N371 416 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 PIK3C3Q8NEB9 887 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 TMEM19Q96HH6 336 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 CRLF2Q9HC73 371 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 USP22Q9UPT9 525 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
PRKDC-203ENST00000432581 SH3PXD2BA1X283 911 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms