RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 M0R233 179 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ERVH48-1M5A8F1 160 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 SIX6O95475 246 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 THY1P04216 161 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 CT62P0C5K7 136 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 LIPCP11150 499 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 EDN3P14138 238 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 NID1P14543 1247 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ATF1P18846 271 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 LCN1P31025 176 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 FGF9P31371 208 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 EMDP50402 254 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 YOD1Q5VVQ6 348 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 FBXO42Q6P3S6 717 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ZNF704Q6ZNC4 412 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 PLCZ1Q86YW0 608 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ANAPC16Q96DE5 110 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 SGTBQ96EQ0 304 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 DGAT2Q96PD7 388 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 TIMM29Q9BSF4 260 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 PIGUQ9H490 435 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 POT1Q9NUX5 634 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 LAMA1P25391 3075 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 A0A1B0GTH9 108 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 ZNF879B4DU55 563 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 GOSR1O95249 250 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 GPR75O95800 540 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 SERPINA3P01011 423 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 ZGLP1P0C6A0 271 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 PF4V1P10720 104 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 NTSR1P30989 418 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 MTNR1BP49286 362 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 CTXN1P60606 82 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 PSMA6P60900 246 aaKnown RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 GALEQ14376 348 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 APOOLQ6UXV4 268 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 KANSL1Q7Z3B3 1105 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 KIAA0907Q7Z7F0 614 aaPredicted RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 NR2C2APQ86WQ0 139 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 COMMD2Q86X83 199 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 TMEM52Q8NDY8 209 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 RLN3Q8WXF3 142 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 NSMAFQ92636 917 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 ELMOD3Q96FG2 381 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 Q96M85 177 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 LMF1Q96S06 567 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 ARHGDIGQ99819 225 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 FAM83CQ9BQN1 747 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 TEX101Q9BY14 249 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 TRIM2Q9C040 744 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 Q9N2J8 555 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 ZFP57Q9NU63 452 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 MRPS33Q9Y291 106 aaKnown RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 FRMPD3Q5JV73 1810 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 ABCA7Q8IZY2 2146 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 TRABD2BA6NFA1 517 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 MCIDASD6RGH6 385 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 L7N2F9 121 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 NDUFB2O95178 105 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 NAGAP17050 411 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 NDUFS1P28331 727 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 AQP2P41181 271 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 EIF1AXP47813 144 aaKnown RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 AGFG1P52594 562 aaKnown RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 ADPRHP54922 357 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 TAS2R43P59537 309 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 YIF1BQ5BJH7 314 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 C1orf185Q5T7R7 199 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 ZNF782Q6ZMW2 699 aaPredicted RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 MEX3BQ6ZN04 569 aaKnown RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 ZNF627Q7L945 461 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 FAM109AQ8N4B1 249 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 MS4A15Q8N5U1 240 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 BOLLQ8N9W6 283 aaKnown RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 AVL9Q8NBF6 648 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 MRPL48Q96GC5 212 aaKnown RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 MICU1Q9BPX6 476 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 TCEAL2Q9H3H9 227 aaPredicted RBP7.41□□□□□ -1.22
HPS4-205ENST00000429411 KLK11Q9UBX7 282 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 KLHL21Q9UJP4 597 aa7.41□□□□□ -1.22
HPS4-205ENST00000429411 UBE2QL1A1L167 161 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 HRKO00198 91 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 CLDN4O14493 209 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 EIF1AYO14602 144 aaKnown RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 ARPC5O15511 151 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 MAOAP21397 527 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 HLA-DMAP28067 261 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 FNTBP49356 437 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 SIRPAP78324 504 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 SNTA1Q13424 505 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 HLA-DQA1Q5Y7H0 255 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 Q6ZSR6 202 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 SLC35D2Q76EJ3 337 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 STX12Q86Y82 276 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 SLC38A6Q8IZM9 456 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 FAM174AQ8TBP5 190 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 THAP3Q8WTV1 239 aaPredicted RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 NR4A3Q92570 626 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 KIAA1143Q96AT1 154 aaPredicted RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 CREB3L1Q96BA8 519 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms