RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 GP6Q9HCN6 339 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 PLSCR4Q9NRQ2 329 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 MAN2C1Q9NTJ4 1040 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 C20orf141Q9NUB4 165 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 ING1Q9UK53 422 aaPredicted RBP12.94□□□□□ -0.34
SGCE-204ENST00000428696 B3GALT5Q9Y2C3 310 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 CORINQ9Y5Q5 1042 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 KLF2Q9Y5W3 355 aaPredicted RBP12.94□□□□□ -0.34
SGCE-204ENST00000428696 SPTBN1Q01082 2364 aaKnown RBP12.94□□□□□ -0.34
SGCE-204ENST00000428696 ARHGAP21Q5T5U3 1957 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 A0A087WUU8 490 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 ZNF724A8MTY0 619 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 RNF13O43567 381 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 OR7A10O76100 309 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 VAMP5O95183 116 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 GPR4P46093 362 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 SPTAN1Q13813 2472 aaKnown RBP12.93□□□□□ -0.34
SGCE-204ENST00000428696 MEX3BQ6ZN04 569 aaKnown RBP12.93□□□□□ -0.34
SGCE-204ENST00000428696 NANOGNBQ7Z5D8 188 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 UEVLDQ8IX04 471 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 OR5J2Q8NH18 312 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 CANT1Q8WVQ1 401 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 POP5Q969H6 163 aaKnown RBP12.93□□□□□ -0.34
SGCE-204ENST00000428696 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 OXGR1Q96P68 337 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 ZNF385AQ96PM9 386 aaKnown RBP12.93□□□□□ -0.34
SGCE-204ENST00000428696 ALPK1Q96QP1 1244 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 CHID1Q9BWS9 393 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 MAGIXQ9H6Y5 334 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 PARPBPQ9NWS1 579 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 GALNT8Q9NY28 637 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 MRPL39Q9NYK5 338 aaKnown RBP12.93□□□□□ -0.34
SGCE-204ENST00000428696 PRSS50Q9UI38 385 aa12.93□□□□□ -0.34
SGCE-204ENST00000428696 DOPEY1Q5JWR5 2465 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 MED12LQ86YW9 2145 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 DOCK7Q96N67 2140 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 BAHCC1Q9P281 2608 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 A0A1W2PRQ8 180 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 AQP12BA6NM10 295 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 EFCAB9A8MZ26 197 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 MS4A18H0YCH9 400 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 TNFRSF11BO00300 401 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 PLPP3O14495 311 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 PRSS23O95084 383 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 CGAP01215 116 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 SEMG1P04279 462 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 RAP2AP10114 183 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 CD8BP10966 210 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 COX6B1P14854 86 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 POU2F1P14859 743 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 CLDN17P56750 224 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 PUDPQ08623 228 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 PPP1R8Q12972 351 aaKnown RBP12.92□□□□□ -0.34
SGCE-204ENST00000428696 DGCR6Q14129 220 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 LAPTM4AQ15012 233 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 PDK3Q15120 406 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 GUSBP1Q15486 140 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 MS4A18Q3C1V0 323 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 CARD17Q5XLA6 110 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 ANKRD34AQ69YU3 496 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 NIPAL3Q6P499 406 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 ZNF474Q6S9Z5 364 aaPredicted RBP12.92□□□□□ -0.34
SGCE-204ENST00000428696 BEND4Q6ZU67 534 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 MBOAT2Q6ZWT7 520 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 CREB3L2Q70SY1 520 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 AQP12AQ8IXF9 295 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 ADGRG5Q8IZF4 528 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 OR6S1Q8NH40 331 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 OR51A7Q8NH64 312 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 SLC7A13Q8TCU3 470 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 FAM46AQ96IP4 442 aaKnown RBP12.92□□□□□ -0.34
SGCE-204ENST00000428696 ZNF426Q9BUY5 554 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 SF3B5Q9BWJ5 86 aaKnown RBP12.92□□□□□ -0.34
SGCE-204ENST00000428696 FKRPQ9H9S5 495 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
SGCE-204ENST00000428696 UPB1Q9UBR1 384 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 ZNF229Q9UJW7 825 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 FLVCR1Q9Y5Y0 555 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 U3KQV3 271 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 DOPEY2Q9Y3R5 2298 aa12.92□□□□□ -0.34
SGCE-204ENST00000428696 IGKV3D-15A0A087WSY6 115 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 OR10H3O60404 316 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 HPRP00739 348 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 ADAP00813 363 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 HLA-DOBP13765 273 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 CDH2P19022 906 aaPredicted RBP12.91□□□□□ -0.34
SGCE-204ENST00000428696 MAKP20794 623 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 P2RY4P51582 365 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 SLC16A1P53985 500 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 POU3F1Q03052 451 aaPredicted RBP12.91□□□□□ -0.34
SGCE-204ENST00000428696 SEC23BQ15437 767 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 ASRGL1Q7L266 308 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 OAFQ86UD1 273 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 KIF18BQ86Y91 864 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 EPHX4Q8IUS5 362 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 RNF113BQ8IZP6 322 aaKnown RBP12.91□□□□□ -0.34
SGCE-204ENST00000428696 SCAIQ8N9R8 606 aa12.91□□□□□ -0.34
SGCE-204ENST00000428696 OR4K5Q8NGD3 323 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms