RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 OR10G2Q8NGC3 310 aa6.27□□□□□ -1.41
CDC7-203ENST00000428239 OR9Q2Q8NGE9 314 aa6.27□□□□□ -1.41
CDC7-203ENST00000428239 GMPPAQ96IJ6 420 aaPredicted RBP6.27□□□□□ -1.41
CDC7-203ENST00000428239 BARD1Q99728 777 aaKnown RBP6.27□□□□□ -1.41
CDC7-203ENST00000428239 TMEM43Q9BTV4 400 aa6.27□□□□□ -1.41
CDC7-203ENST00000428239 IFT27Q9BW83 186 aa6.27□□□□□ -1.41
CDC7-203ENST00000428239 POLR2J2Q9GZM3 115 aaKnown RBP6.27□□□□□ -1.41
CDC7-203ENST00000428239 POLR2J3Q9H1A7 115 aaKnown RBP6.27□□□□□ -1.41
CDC7-203ENST00000428239 OPN3Q9H1Y3 402 aaPredicted RBP6.27□□□□□ -1.41
CDC7-203ENST00000428239 C12orf10Q9HB07 376 aa6.27□□□□□ -1.41
CDC7-203ENST00000428239 C20orf141Q9NUB4 165 aa6.27□□□□□ -1.41
CDC7-203ENST00000428239 MED29Q9NX70 200 aa6.27□□□□□ -1.41
CDC7-203ENST00000428239 B3GALT5Q9Y2C3 310 aa6.27□□□□□ -1.41
CDC7-203ENST00000428239 SHANK1Q9Y566 2161 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 CASKO14936 926 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 SMAD9O15198 467 aaKnown RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 CLOCKO15516 846 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 VAMP5O95183 116 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 SOX14O95416 240 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 MT-ATP6P00846 226 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 RBM34P42696 430 aaKnown RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 CTXN1P60606 82 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 FAPQ12884 760 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 CAMK2DQ13557 499 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 HMBOX1Q6NT76 420 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 XKRXQ6PP77 449 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 MBOAT2Q6ZWT7 520 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 ZDHHC13Q8IUH4 622 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 SYT14Q8NB59 555 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 GIPC3Q8TF64 312 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 PLEKHA8Q96JA3 519 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 MED18Q9BUE0 208 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 RBM24Q9BX46 236 aaKnown RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 TEX12Q9BXU0 123 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 RSPO3Q9BXY4 272 aaPredicted RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 ZNF835Q9Y2P0 537 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 SMG1Q96Q15 3661 aaKnown RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 M0R3G1 203 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 HNRNPRO43390 633 aaKnown RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 RAMP1O60894 148 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 OR7A10O76100 309 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 SLC16A1P53985 500 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 BIDP55957 195 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 CLRN1P58418 232 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 LSM11P83369 360 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDC7-203ENST00000428239 ZNF74Q16587 644 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 LRRC36Q1X8D7 754 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 TMEM44Q2T9K0 475 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 CTU2Q2VPK5 515 aaKnown RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 RTL6Q6ICC9 239 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 YTHDF3Q7Z739 585 aaKnown RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 TSPYL5Q86VY4 417 aaPredicted RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 CHERPQ8IWX8 916 aaKnown RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 ZNF808Q8N4W9 903 aaPredicted RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 ANKK1Q8NFD2 765 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 OR9K2Q8NGE7 335 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 FANK1Q8TC84 345 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 ZFP3Q96NJ6 502 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 SFXN3Q9BWM7 321 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 SLC19A3Q9BZV2 496 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 DENND2DQ9H6A0 471 aaPredicted RBP6.26□□□□□ -1.41
CDC7-203ENST00000428239 FKRPQ9H9S5 495 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 INIPQ9NRY2 104 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 TBC1D23Q9NUY8 699 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 DNAJB9Q9UBS3 223 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 RASD1Q9Y272 281 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 POLR1DQ9Y2S0 133 aa6.26□□□□□ -1.41
CDC7-203ENST00000428239 A0A1W2PNV4 684 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 A0A1W2PRQ8 180 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 FFAR1O14842 300 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 CLDN14O95500 239 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 IFNGR1P15260 489 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 HOXB6P17509 224 aaKnown RBP6.25□□□□□ -1.41
CDC7-203ENST00000428239 PRKACGP22612 351 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 TIMP3P35625 211 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 EGR4Q05215 589 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 DGCR6Q14129 220 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 RIPPLY2Q5TAB7 128 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 Q6ZPB1 254 aaPredicted RBP6.25□□□□□ -1.41
CDC7-203ENST00000428239 ASRGL1Q7L266 308 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 RNF128Q8TEB7 428 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 LRTOMTQ8WZ04 291 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 EME1Q96AY2 570 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 C7orf34Q96L11 122 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 ALKBH3Q96Q83 286 aaPredicted RBP6.25□□□□□ -1.41
CDC7-203ENST00000428239 TNFRSF13CQ96RJ3 184 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 B3GAT2Q9NPZ5 323 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 GLRX2Q9NS18 164 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 CLCF1Q9UBD9 225 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 GRHPRQ9UBQ7 328 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 INTS1Q8N201 2190 aaKnown RBP6.25□□□□□ -1.41
CDC7-203ENST00000428239 EXPH5Q8NEV8 1989 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 IGKV1D-42A0A075B6H8 117 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 UNC119BA6NIH7 251 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 AQP7P3A6NL99 342 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 SOCS2O14508 198 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 ARHGEF9O43307 516 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 SLC43A1O75387 559 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 RCBTB2O95199 551 aa6.25□□□□□ -1.41
CDC7-203ENST00000428239 ERVK-25P63136 954 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms