RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 ALKBH3Q96Q83 286 aaPredicted RBP15.15■□□□□ 0.02
DDR1-235ENST00000428153 PAIP2Q9BPZ3 127 aaKnown RBP15.15■□□□□ 0.02
DDR1-235ENST00000428153 PARD6BQ9BYG5 372 aa15.15■□□□□ 0.02
DDR1-235ENST00000428153 CENPHQ9H3R5 247 aa15.15■□□□□ 0.02
DDR1-235ENST00000428153 PLK3Q9H4B4 646 aa15.15■□□□□ 0.02
DDR1-235ENST00000428153 RAD21L1Q9H4I0 556 aa15.15■□□□□ 0.02
DDR1-235ENST00000428153 ZNF442Q9H7R0 627 aa15.15■□□□□ 0.02
DDR1-235ENST00000428153 RAB21Q9UL25 225 aa15.15■□□□□ 0.02
DDR1-235ENST00000428153 KCNS2Q9ULS6 477 aa15.15■□□□□ 0.02
DDR1-235ENST00000428153 NBEAL1Q6ZS30 2694 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 LOC102725191A0A1B0GVB3 256 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 VSTM5A8MXK1 200 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 ZNF432O94892 652 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 ZNF16P17020 682 aaPredicted RBP15.14■□□□□ 0.01
DDR1-235ENST00000428153 ZNF43P17038 809 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 WDR4P57081 412 aaKnown RBP15.14■□□□□ 0.01
DDR1-235ENST00000428153 NIPAL3Q6P499 406 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 SERPINA11Q86U17 422 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 LSMEM1Q8N8F7 131 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 IL17RDQ8NFM7 739 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 PTDSS2Q9BVG9 487 aa15.14■□□□□ 0.01
DDR1-235ENST00000428153 UPK3AO75631 287 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 CECR9P0C854 216 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 PNMTP11086 282 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 PRG2P13727 222 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 ETS2P15036 469 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 GTF2E2P29084 291 aaKnown RBP15.13■□□□□ 0.01
DDR1-235ENST00000428153 EGR4Q05215 589 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 ADIPOQQ15848 244 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 ZNF311Q5JNZ3 666 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 NXNQ6DKJ4 435 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 SLC46A3Q7Z3Q1 461 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 NET1Q7Z628 596 aaPredicted RBP15.13■□□□□ 0.01
DDR1-235ENST00000428153 BBS10Q8TAM1 723 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 OXGR1Q96P68 337 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 PRR14Q9BWN1 585 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 RAB1BQ9H0U4 201 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 NELFAQ9H3P2 528 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 A4GALTQ9NPC4 353 aa15.13■□□□□ 0.01
DDR1-235ENST00000428153 TMEM120BA0PK00 339 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 AIM2O14862 343 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 UBDO15205 165 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 AKAP8O43823 692 aaKnown RBP15.12■□□□□ 0.01
DDR1-235ENST00000428153 SLC43A1O75387 559 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 LY6HO94772 140 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 OR4A8P0C604 315 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 CBR1P16152 277 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 SRD5A1P18405 259 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 HNF1AP20823 631 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 PRKAR1BP31321 381 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 MRPL19P49406 292 aaKnown RBP15.12■□□□□ 0.01
DDR1-235ENST00000428153 IDH3GP51553 393 aaPredicted RBP15.12■□□□□ 0.01
DDR1-235ENST00000428153 POLR2JP52435 117 aaKnown RBP15.12■□□□□ 0.01
DDR1-235ENST00000428153 ROR2Q01974 943 aaKnown RBP15.12■□□□□ 0.01
DDR1-235ENST00000428153 POU3F1Q03052 451 aaPredicted RBP15.12■□□□□ 0.01
DDR1-235ENST00000428153 GGTLC2Q14390 218 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 MFSD13AQ14CX5 517 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 RGNQ15493 299 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 RPS26P11Q5JNZ5 115 aaPredicted RBP15.12■□□□□ 0.01
DDR1-235ENST00000428153 FAM69AQ5T7M9 428 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 LINGO2Q7L985 606 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 ANKRD42Q8N9B4 389 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 ADPRHL1Q8NDY3 354 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 NEU4Q8WWR8 484 aaPredicted RBP15.12■□□□□ 0.01
DDR1-235ENST00000428153 GTF2H4Q92759 462 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 ANKRD27Q96NW4 1050 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 B3GAT1Q9P2W7 334 aa15.12■□□□□ 0.01
DDR1-235ENST00000428153 LOC100289279A0A1B0GTE1 492 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 ERCC1P07992 297 aaPredicted RBP15.11■□□□□ 0.01
DDR1-235ENST00000428153 KITP10721 976 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 APEHP13798 732 aaKnown RBP15.11■□□□□ 0.01
DDR1-235ENST00000428153 ZNF23P17027 643 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 IGFBP5P24593 272 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 GIFP27352 417 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 ARR3P36575 388 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 CLDN17P56750 224 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 GTDC1Q4AE62 458 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 SLC9B1Q4ZJI4 515 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 C6orf10Q5SRN2 563 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 MIER2Q8N344 545 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 PIK3C3Q8NEB9 887 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 OR6S1Q8NH40 331 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 DNAJA4Q8WW22 397 aaPredicted RBP15.11■□□□□ 0.01
DDR1-235ENST00000428153 SLC38A4Q969I6 547 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 VPS33AQ96AX1 596 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 MSI2Q96DH6 328 aaKnown RBP15.11■□□□□ 0.01
DDR1-235ENST00000428153 FOXN4Q96NZ1 517 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 VRK1Q99986 396 aaPredicted RBP15.11■□□□□ 0.01
DDR1-235ENST00000428153 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDR1-235ENST00000428153 PCDHB14Q9Y5E9 798 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 GMEB1Q9Y692 573 aa15.11■□□□□ 0.01
DDR1-235ENST00000428153 V9GYY5 206 aaPredicted RBP15.11■□□□□ 0.01
DDR1-235ENST00000428153 IGHV4-61A0A0C4DH41 118 aa15.1■□□□□ 0.01
DDR1-235ENST00000428153 CLIC1O00299 241 aa15.1■□□□□ 0.01
DDR1-235ENST00000428153 NR5A2O00482 541 aa15.1■□□□□ 0.01
DDR1-235ENST00000428153 CALCRP30988 508 aa15.1■□□□□ 0.01
DDR1-235ENST00000428153 RPS5P46782 204 aaKnown RBP15.1■□□□□ 0.01
DDR1-235ENST00000428153 LGALS3BPQ08380 585 aa15.1■□□□□ 0.01
DDR1-235ENST00000428153 FAM91A1Q658Y4 838 aa15.1■□□□□ 0.01
DDR1-235ENST00000428153 SLC25A36Q96CQ1 311 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms