RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 TM2D1Q9BX74 207 aa3.68□□□□□ -1.82
NUDCD1-202ENST00000427660 TUBB1Q9H4B7 451 aa3.68□□□□□ -1.82
NUDCD1-202ENST00000427660 PNO1Q9NRX1 252 aaKnown RBP3.68□□□□□ -1.82
NUDCD1-202ENST00000427660 PEF1Q9UBV8 284 aaKnown RBP3.68□□□□□ -1.82
NUDCD1-202ENST00000427660 COPS3Q9UNS2 423 aa3.68□□□□□ -1.82
NUDCD1-202ENST00000427660 PCSK5Q92824 1860 aa3.68□□□□□ -1.82
NUDCD1-202ENST00000427660 BCL9LQ86UU0 1499 aa3.68□□□□□ -1.82
NUDCD1-202ENST00000427660 NUP98P52948 1817 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 IGHV3-16A0A0C4DH30 117 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 FCN1O00602 326 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 SPOPO43791 374 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 TOM1O60784 492 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 LYPD3O95274 346 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 H6PDO95479 791 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 LGALS2P05162 132 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 UMPSP11172 480 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 EIF2S2P20042 333 aaKnown RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 BCL3P20749 454 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ZNF10P21506 573 aaPredicted RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 PPP1R2P41236 205 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ACLYP53396 1101 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 IFT88Q13099 833 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ORC2Q13416 577 aaPredicted RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ALX1Q15699 326 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 C9orf66Q5T8R8 295 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 PIP5KL1Q5T9C9 394 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 SSX9Q7RTT3 188 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ERI1Q8IV48 349 aaKnown RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 Q8NBF4 154 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 TFB1MQ8WVM0 346 aaKnown RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 HTR3CQ8WXA8 447 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 C20orf24Q9BUV8 137 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 JPT2Q9H910 190 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ANKRA2Q9H9E1 313 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 CUTCQ9NTM9 273 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 WARS2Q9UGM6 360 aaKnown RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 TRAV25A0A0B4J276 109 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 FAM220BPB1ANY3 271 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 IDSB3KWA1 339 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 SLC17A2O00624 439 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 OR2F2O95006 317 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 YEATS4O95619 227 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 POP4O95707 220 aaKnown RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 OTCP00480 354 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 TRIM49P0CI25 452 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 TRIM49CP0CI26 452 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 HNRNPH3P31942 346 aaKnown RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 XCR1P46094 333 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 CLDN8P56748 225 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ASPHQ12797 758 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 CUL1Q13616 776 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ALKBH6Q3KRA9 238 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 COPS6Q7L5N1 327 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 CCDC65Q8IXS2 484 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 CSNK1A1LQ8N752 337 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ANKRD49Q8WVL7 239 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 RAPGEF5Q92565 580 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ZNF641Q96N77 438 aaPredicted RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 KCNA7Q96RP8 456 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 CYP2S1Q96SQ9 504 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 MBOAT4Q96T53 435 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 PPA2Q9H2U2 334 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 TDRD3Q9H7E2 651 aaKnown RBP3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 ZNF696Q9H7X3 374 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 IMPAD1Q9NX62 359 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 B3GNT2Q9NY97 397 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 SLC2A6Q9UGQ3 507 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 PITPNC1Q9UKF7 332 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 VANGL2Q9ULK5 521 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 N6AMT1Q9Y5N5 214 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 SLIT2O94813 1529 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 LAMB1P07942 1786 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 THSD7AQ9UPZ6 1657 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 CHD4Q14839 1912 aa3.67□□□□□ -1.82
NUDCD1-202ENST00000427660 CCDC88AQ3V6T2 1871 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 LTBP4Q8N2S1 1624 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 MYH13Q9UKX3 1938 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 LOC100131303A0A0U1RQF7 123 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 ERICH2A1L162 156 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 SUPT3HB4E1H0 165 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 E9PLD3 99 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 LSM1O15116 133 aaKnown RBP3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 SERPIND1P05546 499 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 PTBP1P26599 531 aaKnown RBP eCLIP3.66□□□□□ -1.827e-7■□□□□ 9.3
NUDCD1-202ENST00000427660 NAMPTP43490 491 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 KCNJ2P63252 427 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 VGLL4Q14135 290 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 ISXQ2M1V0 245 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 EIPR1Q53HC9 387 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 TTC19Q6DKK2 380 aaPredicted RBP3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 SLC8B1Q6J4K2 584 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 KIAA1161Q6NSJ0 714 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 TMEM220Q6QAJ8 160 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 KLHDC8BQ8IXV7 354 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 SVOPLQ8N434 492 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 OR4F6Q8NGB9 312 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 PLEKHA8Q96JA3 519 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 ART5Q96L15 291 aa3.66□□□□□ -1.82
NUDCD1-202ENST00000427660 MCHR1Q99705 422 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms