RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SPACA1Q9HBV2 294 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 NFATC4Q14934 902 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 EBPQ15125 230 aaKnown RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 FJX1Q86VR8 437 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 OR5H6Q8NGV6 325 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 GNPNAT1Q96EK6 184 aaPredicted RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 PLEKHF2Q9H8W4 249 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 C12orf10Q9HB07 376 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 RANGRFQ9HD47 186 aaPredicted RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 NXT1Q9UKK6 140 aaKnown RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 STRAPQ9Y3F4 350 aaKnown RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 NPIPB15A6NHN6 443 aaPredicted RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 SSTR4P31391 388 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 USP36Q9P275 1121 aaKnown RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 WNT11O96014 354 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 MFSD6LQ8IWD5 586 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 SLC30A3Q99726 388 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 RBPJLQ9UBG7 517 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 EMC9Q9Y3B6 208 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 HCCSP53701 268 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 SIM1P81133 766 aaPredicted RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 NXNL2Q5VZ03 156 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 CYB561A3Q8NBI2 242 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 CACNG4Q9UBN1 327 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 PURGQ9UJV8 347 aaKnown RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 MRPL33O75394 65 aaKnown RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 CD53P19397 219 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 MOB3CQ70IA8 216 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 RBPMSQ93062 196 aaKnown RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 BOD1Q96IK1 185 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF142P52746 1687 aaPredicted RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 DEFA4P12838 97 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 C20orf85Q9H1P6 137 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 OR52A1Q9UKL2 312 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 CDK5RAP2Q96SN8 1893 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF264O43296 627 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 SLC16A7O60669 478 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 GPX3P22352 226 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 ITGB8P26012 769 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 TMEM184AQ6ZMB5 413 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 FCRLAQ7L513 359 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 SLC16A14Q7RTX9 510 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 OR52H1Q8NGJ2 320 aa13.45□□□□□ -0.26
PTPN13-203ENST00000427191 MARCH4Q9P2E8 410 aaPredicted RBP13.45□□□□□ -0.26
PTPN13-203ENST00000427191 GJA5P36382 358 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 CSNK1DP48730 415 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 HTRA4P83105 476 aaPredicted RBP13.44□□□□□ -0.26
PTPN13-203ENST00000427191 RNF175Q8N4F7 328 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 PIGQQ9BRB3 760 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 PODNL1Q6PEZ8 512 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 OR2F2O95006 317 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 SDC1P18827 310 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 UBE2G1P62253 170 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 SIRPAP78324 504 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 IKZF1Q13422 519 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 OR2F1Q13607 317 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 SLC9A3R2Q15599 337 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 LGI3Q8N145 548 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 OR51L1Q8NGJ5 315 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 IGSF8Q969P0 613 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 APH1AQ96BI3 265 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 HIST1H1TP22492 207 aaPredicted RBP13.44□□□□□ -0.26
PTPN13-203ENST00000427191 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 RTP3Q9BQQ7 232 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 TUSC2O75896 110 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 MAP4K2Q12851 820 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 CRMP1Q14194 572 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 SFXN4Q6P4A7 337 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 OR6K3Q8NGY3 331 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 PDLIM5Q96HC4 596 aaKnown RBP13.44□□□□□ -0.26
PTPN13-203ENST00000427191 GPR45Q9Y5Y3 372 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 DVL1O14640 695 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 GDNFP39905 211 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 VASPP50552 380 aaPredicted RBP13.44□□□□□ -0.26
PTPN13-203ENST00000427191 DVL1P1P54792 670 aaPredicted RBP13.44□□□□□ -0.26
PTPN13-203ENST00000427191 OR6M1Q8NGM8 313 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 PIGCQ92535 297 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 LAMP3Q9UQV4 416 aa13.44□□□□□ -0.26
PTPN13-203ENST00000427191 CASP3P42574 277 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 NPY5RQ15761 445 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 LYRM7Q5U5X0 104 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 PM20D1Q6GTS8 502 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 MBOAT2Q6ZWT7 520 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 TM7SF3Q9NS93 570 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 VSX1Q9NZR4 365 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 MYEF2Q9P2K5 600 aaKnown RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 FAM155AB1AL88 458 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 HTR1FP30939 366 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 HBA1P69905 142 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 TSACCQ96A04 125 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 ATF6BQ99941 703 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 NXF5Q9H1B4 397 aaKnown RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 TUBAL3A6NHL2 446 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 ALPLP05186 524 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 CHRM2P08172 466 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms