RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 EIF4EBP1Q13541 118 aaPredicted RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CAMK2DQ13557 499 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 DMC1Q14565 340 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PDK1Q15118 436 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 ZMYND11Q15326 602 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TRIP13Q15645 432 aaPredicted RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PSMD5Q16401 504 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PDK4Q16654 411 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 LRRC36Q1X8D7 754 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TCHHL1Q5QJ38 904 aaPredicted RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 AADACL4Q5VUY2 407 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PRMT9Q6P2P2 845 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 ISLR2Q6UXK2 745 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 LINC00299Q6ZSB3 139 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TMEM26Q6ZUK4 368 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 MOB2Q70IA6 237 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PRSS42Q7Z5A4 293 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TMEM179BQ7Z7N9 219 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 ASPGQ86U10 573 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SLC22A16Q86VW1 577 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 GPBP1Q86WP2 473 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TMEM126BQ8IUX1 230 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SLC22A9Q8IVM8 553 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 C4orf33Q8N1A6 199 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 LIX1Q8N485 282 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 IPMKQ8NFU5 416 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 OR4M1Q8NGD0 313 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 OR8H1Q8NGG4 311 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 RAB3IL1Q8TBN0 382 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TCP10LQ8TDR4 215 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PYDC1Q8WXC3 89 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 MCUR1Q96AQ8 359 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TESCQ96BS2 214 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SH3YL1Q96HL8 342 aaPredicted RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CNDP2Q96KP4 475 aaKnown RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 FOPNLQ96NB1 174 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PLIN2Q99541 437 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 C12orf57Q99622 126 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 LRRC2Q9BYS8 371 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 GCOM2Q9BZD3 368 aaPredicted RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 OSBPL8Q9BZF1 889 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 NAA50Q9GZZ1 169 aaKnown RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 Q9H521 79 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TUFT1Q9NNX1 390 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SLCO1B3Q9NPD5 702 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 IFT46Q9NQC8 304 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 GPR173Q9NS66 373 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 AGPAT5Q9NUQ2 364 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 DNAJC17Q9NVM6 304 aaKnown RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 SMOXQ9NWM0 555 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 B3GNT2Q9NY97 397 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 GLTPQ9NZD2 209 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 TMEM216Q9P0N5 145 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 VPS54Q9P1Q0 977 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 NARFQ9UHQ1 456 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 RWDD2AQ9UIY3 292 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 RIMS3Q9UJD0 308 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 CLEC4AQ9UMR7 237 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 COPS3Q9UNS2 423 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 ERVK-19Q9WJR5 959 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 ENTPD4Q9Y227 616 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 MRPS7Q9Y2R9 242 aaKnown RBP2.52□□□□□ -2.01
LINC01040-201ENST00000425048 PLLPQ9Y342 182 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 MRC1P22897 1456 aa2.52□□□□□ -2.01
LINC01040-201ENST00000425048 METP08581 1390 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 A0A087WXM4 84 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 A0A0D9SFI3 127 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 A0A0U1RQK1 487 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 PQLC2LA1A4F0 135 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 FAM170AA1A519 330 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 ARGFXA6NJG6 315 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 BTNL10A8MVZ5 291 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 HACD1B0YJ81 288 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 FAM25AB3EWG3 89 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 FAM25CB3EWG5 89 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 FAM25GB3EWG6 89 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 GOLGA8SH3BPF8 625 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 PGRMC1O00264 195 aaKnown RBP2.51□□□□□ -2.01
LINC01040-201ENST00000425048 PRKAB2O43741 272 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 GMDSO60547 372 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 NOS1APO75052 506 aaPredicted RBP2.51□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF780AO75290 641 aaPredicted RBP2.51□□□□□ -2.01
LINC01040-201ENST00000425048 PSIP1O75475 530 aaKnown RBP2.51□□□□□ -2.01
LINC01040-201ENST00000425048 SPAG6O75602 509 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 SURF6O75683 361 aaKnown RBP2.51□□□□□ -2.01
LINC01040-201ENST00000425048 IL1BP01584 269 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 EPOP01588 193 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 HSMCR30P0CW71 290 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 CYP11B1P15538 503 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF250P15622 560 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF30P17039 623 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 IFNAR1P17181 557 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 GAP43P17677 238 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 NCF2P19878 526 aaPredicted RBP2.51□□□□□ -2.01
LINC01040-201ENST00000425048 PTAFRP25105 342 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 EEF1DP29692 281 aaKnown RBP2.51□□□□□ -2.01
LINC01040-201ENST00000425048 CD40LGP29965 261 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 CCND2P30279 289 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 SERPINB1P30740 379 aa2.51□□□□□ -2.01
LINC01040-201ENST00000425048 TIA1P31483 386 aaKnown RBP eCLIP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms