RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ZCCHC4Q9H5U6 513 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 KRCC1Q9NPI7 259 aaPredicted RBP13.14□□□□□ -0.31
MSH5-206ENST00000423982 INPP5EQ9NRR6 644 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 ING1Q9UK53 422 aaPredicted RBP13.14□□□□□ -0.31
MSH5-206ENST00000423982 SIT1Q9Y3P8 196 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 ADAM18Q9Y3Q7 739 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 A0A1B0GUH1 482 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 C4orf47A7E2U8 309 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 SELENOFO60613 162 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 HIST1H1CP16403 213 aaKnown RBP13.14□□□□□ -0.31
MSH5-206ENST00000423982 ZNF3P17036 446 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 SRMP19623 302 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 MAOBP27338 520 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 PTH2RP49190 550 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 CSRP2Q16527 193 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 HDDC2Q7Z4H3 204 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 NRROSQ86YC3 692 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 DNAAF1Q8NEP3 725 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 ZPLD1Q8TCW7 415 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 SNX33Q8WV41 574 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 TSPAN10Q9H1Z9 355 aaPredicted RBP13.14□□□□□ -0.31
MSH5-206ENST00000423982 FBRSQ9HAH7 460 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 NRIP3Q9NQ35 241 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 ZC4H2Q9NQZ6 224 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 PCP4L1A6NKN8 68 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 TOR1AO14656 332 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 OGG1O15527 345 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 STX11O75558 287 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 DUSP8Q13202 625 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 ARHGAP11BQ3KRB8 267 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 THEM6Q8WUY1 208 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 GINS4Q9BRT9 223 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 PITHD1Q9GZP4 211 aaPredicted RBP13.13□□□□□ -0.31
MSH5-206ENST00000423982 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 EML5Q05BV3 1969 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 LRRC72A6NJI9 287 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 PRR32B1ATL7 298 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 GALR3O60755 368 aaPredicted RBP13.13□□□□□ -0.31
MSH5-206ENST00000423982 PTP4A3O75365 173 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 ARL6IP5O75915 188 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 KRT33AO76009 404 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 VSIG10L2P0DP72 767 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 DPP4P27487 766 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 ARHGDIBP52566 201 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 ARFIP1P53367 373 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 H2BFSP57053 126 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 ZNF273Q14593 569 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 CEBPEQ15744 281 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 AMZ1Q400G9 498 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 ZNF542PQ5EBM4 170 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 LRRC25Q8N386 305 aaPredicted RBP13.13□□□□□ -0.31
MSH5-206ENST00000423982 SYNPRQ8TBG9 265 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 MCCC2Q9HCC0 563 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 GPR160Q9UJ42 338 aa13.13□□□□□ -0.31
MSH5-206ENST00000423982 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 A0A1B0GVT2 93 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 OR2M5A3KFT3 312 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 DUXAA6NLW8 204 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 IFITM5A6NNB3 132 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 PYCARD-AS1I3L0S3 204 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 CTDSPLO15194 276 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 LDB3O75112 727 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 P2RX1P51575 399 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 NANOS3P60323 173 aaKnown RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 DMWDQ09019 674 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 FHL1Q13642 323 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 EXOSC7Q15024 291 aaKnown RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 HYAL4Q2M3T9 481 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 DEFB134Q4QY38 66 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 FAM69AQ5T7M9 428 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 ADAMTSL4Q6UY14 1074 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 TMPRSS11FQ6ZWK6 438 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 TTLQ8NG68 377 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 C1orf216Q8TAB5 229 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 LCORQ96JN0 433 aaPredicted RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 FXYD6Q9H0Q3 95 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 FLRT3Q9NZU0 649 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 TECTAO75443 2155 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 GXYLT2A0PJZ3 443 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 GABARAPH6UMI1 98 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 IGF2P01344 180 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 CDK2P24941 298 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 DCST2Q5T1A1 773 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 DCAF12L2Q5VW00 463 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 VN1R4Q7Z5H5 301 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 CDK20Q8IZL9 346 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 FAM71CQ8NEG0 241 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 FCAMRQ8WWV6 532 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 RGP1Q92546 391 aaPredicted RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 ARL6Q9H0F7 186 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 TMEM69Q5SWH9 247 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 OR7E24Q6IFN5 339 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 SLC35F2Q8IXU6 374 aa13.12□□□□□ -0.31
MSH5-206ENST00000423982 RELL2Q8NC24 303 aaPredicted RBP13.12□□□□□ -0.31
MSH5-206ENST00000423982 OR4D10Q8NGI6 311 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms