RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ZNF275Q9NSD4 429 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 MID2Q9UJV3 735 aa14.38□□□□□ -0.11
CHCHD3-202ENST00000423635 A8MVM7 634 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 COPEO14579 308 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 BCL10O95999 233 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 HKR1P10072 659 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 UQCRBP14927 111 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 GLRXP35754 106 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 GPAT3Q53EU6 434 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 MDP1Q86V88 176 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 LRRC17Q8N6Y2 441 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 OR4A15Q8NGL6 344 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 YIPF5Q969M3 257 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 NEURL3Q96EH8 262 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 TMPRSS13Q9BYE2 586 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 ADPRHL2Q9NX46 363 aa14.37□□□□□ -0.11
CHCHD3-202ENST00000423635 CMYA5Q8N3K9 4069 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 NPIPB7O75200 414 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 CHRM4P08173 479 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 TFPTP0C1Z6 253 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF35P13682 527 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 TCN1P20061 433 aaPredicted RBP14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 RPS4Y1P22090 263 aaKnown RBP14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 SEC24CP53992 1094 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 UBA52P62987 128 aaKnown RBP14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 HPCAP84074 193 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 NPRL3Q12980 569 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 WHAMMP3Q1A5X7 153 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 ACSM5Q6NUN0 579 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 TREML4Q6UXN2 200 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 ZCCHC23Q6ZST2 131 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 TRNT1Q96Q11 434 aaKnown RBP14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 SLC6A7Q99884 636 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF416Q9BWM5 594 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 TXLNGYQ9BZA5 131 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 SLC38A1Q9H2H9 487 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 MTHFD2LQ9H903 347 aaPredicted RBP14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 GPR35Q9HC97 309 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 B3GNT2Q9NY97 397 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 RCE1Q9Y256 329 aa14.36□□□□□ -0.11
CHCHD3-202ENST00000423635 PRSS51A0A1B0GVH4 220 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 HMGN4O00479 90 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 PPIHO43447 177 aaKnown RBP14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 FRS3O43559 492 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 RP2O75695 350 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 EMX2Q04743 252 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 BNIP2Q12982 314 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 MAD2L1Q13257 205 aaPredicted RBP14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 GNA13Q14344 377 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 MRPL2Q5T653 305 aaKnown RBP14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 PRAMEF8Q5VWM4 474 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 PRAMEF7Q5VXH5 474 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 LRRC74BQ6ZQY2 392 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF440Q8IYI8 595 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 NANPQ8TBE9 248 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF837Q96EG3 531 aaPredicted RBP14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF75AQ96N20 296 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF385DQ9H6B1 395 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 NTN4Q9HB63 628 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 ASIC5Q9NY37 505 aa14.35□□□□□ -0.11
CHCHD3-202ENST00000423635 A0A0G2JMP0 313 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 A0A0X1KG70 313 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 J3QLI3 93 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 PLPP2O43688 288 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 IL7RP16871 459 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 KRT4P19013 534 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 ALDH3A1P30838 453 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 ACAA2P42765 397 aaKnown RBP14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 CLDN17P56750 224 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 SYPL1Q16563 259 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 SMU1Q2TAY7 513 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 CEACAM16Q2WEN9 425 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF311Q5JNZ3 666 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 C1orf140Q5VVS0 124 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 OR4M2Q8NGB6 313 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 MFSD8Q8NHS3 518 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 AGR3Q8TD06 166 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 TUBGCP3Q96CW5 907 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF665Q9H7R5 613 aa14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 DDX28Q9NUL7 540 aaKnown RBP14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 MARCOQ9UEW3 520 aaPredicted RBP14.34□□□□□ -0.11
CHCHD3-202ENST00000423635 PRKDCP78527 4128 aaKnown RBP14.33□□□□□ -0.11
CHCHD3-202ENST00000423635 ZNF99A8MXY4 864 aaPredicted RBP14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 FTCDNL1E5RQL4 147 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 SLC43A1O75387 559 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 MPZL1O95297 269 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 CPSF4O95639 269 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 DBIP07108 87 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 ARAFP10398 606 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 ZNF43P17038 809 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 FXNQ16595 210 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 TUSC1Q2TAM9 212 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 ANXA8L1Q5VT79 327 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 WBP2NLQ6ICG8 309 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 LRP11Q86VZ4 500 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 ANKRD46Q86W74 232 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 KDM8Q8N371 416 aa14.33□□□□□ -0.12
CHCHD3-202ENST00000423635 C17orf53Q8N3J3 647 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms