RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 SEC61A2Q9H9S3 476 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 LPAR2Q9HBW0 351 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 RBM22Q9NW64 420 aaKnown RBP eCLIP6.32□□□□□ -1.41e-7■■■■■ 31.6
CNOT4-205ENST00000423368 HACL1Q9UJ83 578 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 TNFSF13BQ9Y275 285 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 CARHSP1Q9Y2V2 147 aaKnown RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 NOP16Q9Y3C1 178 aaKnown RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 MEGF6O75095 1541 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 DOCK2Q92608 1830 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 BLACEA4D250 179 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 TMEM210A6NLX4 147 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 DHRS7CA6NNS2 312 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 ZNF705FA8MVS1 300 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 SEC14L6B5MCN3 397 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 AQP8O94778 261 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 SCGB1D2O95969 90 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 ZNF705DP0CH99 300 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 ZNF705BP0CI00 300 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 NAA10P41227 235 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 SLC37A1P57057 533 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 TAP2Q03519 686 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 NDUFA9Q16795 377 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 MARC1Q5VT66 337 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 JMJD6Q6NYC1 403 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 ERN2Q76MJ5 926 aaKnown RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 CAMKMTQ7Z624 323 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 C17orf64Q86WR6 236 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 VRK3Q8IV63 474 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 SLC35G3Q8N808 338 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 GMCL1P1Q8NEA9 526 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 SKA2Q8WVK7 121 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 RAB24Q969Q5 203 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 R3HDM4Q96D70 268 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 PGAM5Q96HS1 289 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 SLC25A18Q9H1K4 315 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 LRTM1Q9HBL6 345 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 JPH1Q9HDC5 661 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 MAN2C1Q9NTJ4 1040 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 LUZP4Q9P127 313 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 SUSD2Q9UGT4 822 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 PPIL1Q9Y3C6 166 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 ZNF337Q9Y3M9 751 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 CHTOPQ9Y3Y2 248 aaKnown RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 CCL27Q9Y4X3 112 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 SIRT4Q9Y6E7 314 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-205ENST00000423368 HEATR5AQ86XA9 2040 aa6.32□□□□□ -1.4
CNOT4-205ENST00000423368 MED12Q93074 2177 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 TGIF2-C20orf24A0A0A6YYL0 155 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 TRBV11-1A0A0K0K1C0 115 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 PRAMEF25A6NGN4 478 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 UNC119BA6NIH7 251 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 MATN3O15232 486 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 B4GALT5O43286 388 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 ZNF821O75541 412 aaPredicted RBP6.31□□□□□ -1.4
CNOT4-205ENST00000423368 GZMBP10144 247 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 GZMHP20718 246 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 RBMS1P29558 406 aaKnown RBP6.31□□□□□ -1.4
CNOT4-205ENST00000423368 WNT5AP41221 380 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 CRYBA2P53672 197 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 RAP1AP62834 184 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 SHC2P98077 582 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 UPP1Q16831 310 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 SYT14P1Q58G82 188 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 ATG9BQ674R7 924 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 LEMD1Q68G75 181 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 CYB5RLQ6IPT4 315 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 TEX38Q6PEX7 206 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 SMARCD3Q6STE5 483 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 VITQ6UXI7 678 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 ZNF610Q8N9Z0 462 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 FBXO15Q8NCQ5 510 aaPredicted RBP6.31□□□□□ -1.4
CNOT4-205ENST00000423368 NFKBIDQ8NI38 313 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 LGALS14Q8TCE9 139 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 PPP1R1CQ8WVI7 109 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 KIRREL1Q96J84 757 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 SMIM3Q9BZL3 60 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 RNF122Q9H9V4 155 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.31□□□□□ -1.4
CNOT4-205ENST00000423368 GKN1Q9NS71 199 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 PRODH2Q9UF12 536 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 SF3B6Q9Y3B4 125 aaKnown RBP6.31□□□□□ -1.4
CNOT4-205ENST00000423368 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.31□□□□□ -1.4
CNOT4-205ENST00000423368 DNAH14Q0VDD8 3507 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 A0A1B0GUH1 482 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 A0A1W2PPQ1 181 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 MAGEB17A8MXT2 336 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 MCIDASD6RGH6 385 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 BHLHE40O14503 412 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 ADAM10O14672 748 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 CCL25O15444 150 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 NME2P1O60361 137 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 H1F0P07305 194 aaKnown RBP6.31□□□□□ -1.4
CNOT4-205ENST00000423368 COX7A2P14406 83 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 NDUFS1P28331 727 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 RFX3P48380 749 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 RPS26P62854 115 aaKnown RBP6.31□□□□□ -1.4
CNOT4-205ENST00000423368 TLE4Q04727 773 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 PJVKQ0ZLH3 352 aa6.31□□□□□ -1.4
CNOT4-205ENST00000423368 ATPAF1Q5TC12 328 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms