RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 UPB1Q9UBR1 384 aa13.56□□□□□ -0.24
SPC24-201ENST00000423327 ZANQ9Y493 2812 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 NSD1Q96L73 2696 aaPredicted RBP13.55□□□□□ -0.24
SPC24-201ENST00000423327 TRAV36DV7A0A075B6V5 113 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 ARHGEF9O43307 516 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 TRAF3IP2O43734 574 aaPredicted RBP13.55□□□□□ -0.24
SPC24-201ENST00000423327 SERPINB7O75635 380 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 HPRP00739 348 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 CD40P25942 277 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 GRPRP30550 384 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 CDH11P55287 796 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 NCALDP61601 193 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 RPS4XP62701 263 aaKnown RBP13.55□□□□□ -0.24
SPC24-201ENST00000423327 VMACQ2NL98 169 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 HIKESHIQ53FT3 197 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 OR7E24Q6IFN5 339 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 C17orf78Q8N4C9 275 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 BHLHE22Q8NFJ8 381 aaPredicted RBP13.55□□□□□ -0.24
SPC24-201ENST00000423327 SMAP2Q8WU79 429 aaPredicted RBP13.55□□□□□ -0.24
SPC24-201ENST00000423327 LRRC58Q96CX6 371 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 SLC47A1Q96FL8 570 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 SLC41A3Q96GZ6 507 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 BOD1Q96IK1 185 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 COX4I2Q96KJ9 171 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 MOGAT1Q96PD6 335 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 HEATR1Q9H583 2144 aaKnown RBP13.55□□□□□ -0.24
SPC24-201ENST00000423327 TLN2Q9Y4G6 2542 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 CSPG4Q6UVK1 2322 aa13.55□□□□□ -0.24
SPC24-201ENST00000423327 FN1P02751 2386 aaKnown RBP13.54□□□□□ -0.24
SPC24-201ENST00000423327 MS4A18H0YCH9 400 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 H7C1Q1 480 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 MRASO14807 208 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 FMO6PO60774 539 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 TMCC2O75069 709 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
SPC24-201ENST00000423327 INHBBP09529 407 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 HLA-DOBP13765 273 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 CDKN1AP38936 164 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 CLDN17P56750 224 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 MS4A18Q3C1V0 323 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 COQ5Q5HYK3 327 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 C5orf46Q6UWT4 87 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 NHLRC1Q6VVB1 395 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 LINC00114Q6XXX2 140 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 CCDC80Q76M96 950 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 SSX8Q7RTT4 187 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 DTX2Q86UW9 622 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 RANBP3LQ86VV4 465 aaPredicted RBP13.54□□□□□ -0.24
SPC24-201ENST00000423327 SNX32Q86XE0 403 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 ADPRHL1Q8NDY3 354 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 OR1K1Q8NGR3 316 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 ZNF317Q96PQ6 595 aaPredicted RBP13.54□□□□□ -0.24
SPC24-201ENST00000423327 MCHR1Q99705 422 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 TRAF4Q9BUZ4 470 aaPredicted RBP13.54□□□□□ -0.24
SPC24-201ENST00000423327 CXorf56Q9H5V9 222 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 TMEM27Q9HBJ8 222 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 CISD1Q9NZ45 108 aaKnown RBP13.54□□□□□ -0.24
SPC24-201ENST00000423327 ARMCX1Q9P291 453 aa13.54□□□□□ -0.24
SPC24-201ENST00000423327 CPSF4LA6NMK7 179 aaKnown RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 E7EQL1 145 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 M0R1B8 84 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 AIM2O14862 343 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 OR2T1O43869 369 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 NDUFS7O75251 213 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 C8BP07358 591 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 PTAFRP25105 342 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 ENTPD8Q5MY95 495 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 C11orf71Q6IPW1 123 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 TMEM108Q6UXF1 575 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 H1FNTQ75WM6 255 aaPredicted RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 PATL1Q86TB9 770 aaKnown RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 TMEM123Q8N131 208 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 OR8J3Q8NGG0 315 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 OR6S1Q8NH40 331 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 VANGL1Q8TAA9 524 aaPredicted RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 ZNF837Q96EG3 531 aaPredicted RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 OXGR1Q96P68 337 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 LINC00470Q9BZP3 86 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 EVA1AQ9H8M9 152 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 GMPR2Q9P2T1 348 aaKnown RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 RCE1Q9Y256 329 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 B3GALT5Q9Y2C3 310 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 AMDHD2Q9Y303 409 aa13.53□□□□□ -0.24
SPC24-201ENST00000423327 ANK3Q12955 4377 aaKnown RBP13.53□□□□□ -0.24
SPC24-201ENST00000423327 LOC100653049A0A140TA62 436 aa13.52□□□□□ -0.25
SPC24-201ENST00000423327 BBIP1A8MTZ0 92 aa13.52□□□□□ -0.25
SPC24-201ENST00000423327 CHP2O43745 196 aa13.52□□□□□ -0.25
SPC24-201ENST00000423327 KRT34O76011 436 aa13.52□□□□□ -0.25
SPC24-201ENST00000423327 ZNF43P17038 809 aa13.52□□□□□ -0.25
SPC24-201ENST00000423327 HOXB4P17483 251 aaPredicted RBP13.52□□□□□ -0.25
SPC24-201ENST00000423327 TNFRSF1BP20333 461 aa13.52□□□□□ -0.25
SPC24-201ENST00000423327 GTF2E2P29084 291 aaKnown RBP13.52□□□□□ -0.25
SPC24-201ENST00000423327 ATP5J2P56134 94 aa13.52□□□□□ -0.25
SPC24-201ENST00000423327 CYLC2Q14093 348 aaPredicted RBP13.52□□□□□ -0.25
SPC24-201ENST00000423327 TBRG1Q3YBR2 411 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms