RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 PDE5AO76074 875 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 ERCC1P07992 297 aaPredicted RBP14.06□□□□□ -0.16
COL18A1-205ENST00000423214 ZCCHC18P0CG32 403 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 HNRNPCL4P0DMR1 293 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 PRG2P13727 222 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 IGFBP5P24593 272 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 SERPINF1P36955 418 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 NR4A2P43354 598 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 P2RY4P51582 365 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 MVDP53602 400 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 ROR2Q01974 943 aaKnown RBP14.06□□□□□ -0.16
COL18A1-205ENST00000423214 NAAAQ02083 359 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 IQCCQ4KMZ1 466 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 ZNF311Q5JNZ3 666 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 MSANTD1Q6ZTZ1 278 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 SERPINA11Q86U17 422 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 CLIP4Q8N3C7 705 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 ANKS4BQ8N8V4 417 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 OR9I1Q8NGQ6 314 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 LRRC8CQ8TDW0 803 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 SLC25A36Q96CQ1 311 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 ZIM2Q9NZV7 527 aa14.06□□□□□ -0.16
COL18A1-205ENST00000423214 A0A096LPE4 126 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 LOC100289279A0A1B0GTE1 492 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 A0A1W2PPZ6 126 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 LOC390937A0A1W2PQ73 354 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 VWC2LB2RUY7 222 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 SLC43A1O75387 559 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 OR4A8P0C604 315 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 CECR9P0C854 216 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 PNMTP11086 282 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 ZNF43P17038 809 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 RPS5P46782 204 aaKnown RBP14.05□□□□□ -0.16
COL18A1-205ENST00000423214 PPOXP50336 477 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 CLDN17P56750 224 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 IL1RL1Q01638 556 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 MST1LQ2TV78 715 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 C3orf36Q3SXR2 165 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 GTDC1Q4AE62 458 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 ANKRD16Q6P6B7 361 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 EPGNQ6UW88 154 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 IL17RELQ6ZVW7 336 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 HDXQ7Z353 690 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 ARIH2OSQ8N7S6 290 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 MFSD8Q8NHS3 518 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 MAGEE2Q8TD90 523 aaPredicted RBP14.05□□□□□ -0.16
COL18A1-205ENST00000423214 DYDC1Q8WWB3 177 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 LINC00470Q9BZP3 86 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 RAD21L1Q9H4I0 556 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 CRNNQ9UBG3 495 aaPredicted RBP14.05□□□□□ -0.16
COL18A1-205ENST00000423214 FBXO9Q9UK97 447 aaPredicted RBP14.05□□□□□ -0.16
COL18A1-205ENST00000423214 RCE1Q9Y256 329 aa14.05□□□□□ -0.16
COL18A1-205ENST00000423214 NR5A2O00482 541 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 AKAP8O43823 692 aaKnown RBP14.04□□□□□ -0.16
COL18A1-205ENST00000423214 NPIPB7O75200 414 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 UPK3AO75631 287 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 POLR2JP52435 117 aaKnown RBP14.04□□□□□ -0.16
COL18A1-205ENST00000423214 C1DQ13901 141 aaKnown RBP14.04□□□□□ -0.16
COL18A1-205ENST00000423214 ADIPOQQ15848 244 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 LINGO2Q7L985 606 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 EPHX4Q8IUS5 362 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 GPR137CQ8N3F9 429 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 GOLGA6L1Q8N7Z2 621 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 ZNF540Q8NDQ6 660 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 OR4F15Q8NGB8 312 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 BBS10Q8TAM1 723 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 BCL2L2Q92843 193 aaPredicted RBP14.04□□□□□ -0.16
COL18A1-205ENST00000423214 VPS33AQ96AX1 596 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 C7orf26Q96N11 449 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 EBF4Q9BQW3 602 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 RAB1BQ9H0U4 201 aa14.04□□□□□ -0.16
COL18A1-205ENST00000423214 SDR39U1Q9NRG7 319 aaPredicted RBP14.04□□□□□ -0.16
COL18A1-205ENST00000423214 IGHV4-61A0A0C4DH41 118 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 VSTM5A8MXK1 200 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 C5orf58C9J3I9 102 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 hCG_2039718K7EN88 272 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 AIM2O14862 343 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 HOXB1P14653 301 aaPredicted RBP14.03□□□□□ -0.16
COL18A1-205ENST00000423214 CAPZA2P47755 286 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 IDH3AP50213 366 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 IDH3GP51553 393 aaPredicted RBP14.03□□□□□ -0.16
COL18A1-205ENST00000423214 NCALDP61601 193 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 NPRL3Q12980 569 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 EFNB3Q15768 340 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 C5orf46Q6UWT4 87 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 MIER2Q8N344 545 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 KDM8Q8N371 416 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 SLC38A4Q969I6 547 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 SLC35B4Q969S0 331 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 MSI2Q96DH6 328 aaKnown RBP14.03□□□□□ -0.16
COL18A1-205ENST00000423214 FOXN4Q96NZ1 517 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 PTDSS2Q9BVG9 487 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 PRR14Q9BWN1 585 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 BPESC1Q9GZL8 116 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 NELFAQ9H3P2 528 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 PLK3Q9H4B4 646 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 SEC61A2Q9H9S3 476 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 DYNLRB1Q9NP97 96 aa14.03□□□□□ -0.16
COL18A1-205ENST00000423214 ARGLU1Q9NWB6 273 aaPredicted RBP14.03□□□□□ -0.16
COL18A1-205ENST00000423214 SVEP1Q4LDE5 3571 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms