RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 NANOGNBQ7Z5D8 188 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 MCEMP1Q8IX19 187 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 CDK20Q8IZL9 346 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 GCNT2Q8N0V5 402 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 OR9Q2Q8NGE9 314 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 RND1Q92730 232 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 GMPPAQ96IJ6 420 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-202ENST00000422991 BCO1Q9HAY6 547 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 GP6Q9HCN6 339 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 GLRX2Q9NS18 164 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 KLHL13Q9P2N7 655 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 Q9UFV3 132 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 ERRFI1Q9UJM3 462 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-202ENST00000422991 RASD1Q9Y272 281 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 DOPEY1Q5JWR5 2465 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 A0A1W2PNV4 684 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 ARRDC5A6NEK1 342 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 HSPB2A8KAH6 182 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 PLPP3O14495 311 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 CDC42EP2O14613 210 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 E2F6O75461 281 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 VAMP5O95183 116 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 HPRP00739 348 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 HIST1H2ABP04908 130 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 CRHP06850 196 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 TSPAN19P0C672 248 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 TMIGD3P0DMS9 266 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-202ENST00000422991 SAGP10523 405 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-202ENST00000422991 UQCRC1P31930 480 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 IFNGR2P38484 337 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 SLC9A3P48764 834 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 RPS4XP62701 263 aaKnown RBP15.13■□□□□ 0.01
COL7A1-202ENST00000422991 PUDPQ08623 228 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 FOXF2Q12947 444 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 FHL1Q13642 323 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 SLC17A1Q14916 467 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 HSPB2Q16082 182 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 GTF2IRD2BQ6EKJ0 949 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 HIST3H2AQ7L7L0 130 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 ZER1Q7Z7L7 766 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 AMIGO2Q86SJ2 522 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 GTF2IRD2Q86UP8 949 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 OR9K2Q8NGE7 335 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 OR13C2Q8NGS9 318 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 STMN2Q93045 179 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 HIST1H2ACQ93077 130 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 INTS12Q96CB8 462 aaKnown RBP15.13■□□□□ 0.01
COL7A1-202ENST00000422991 GPA33Q99795 319 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 SF3B5Q9BWJ5 86 aaKnown RBP15.13■□□□□ 0.01
COL7A1-202ENST00000422991 B3GAT1Q9P2W7 334 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 CLEC4AQ9UMR7 237 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 DOPEY2Q9Y3R5 2298 aa15.13■□□□□ 0.01
COL7A1-202ENST00000422991 LOC102725191A0A1B0GVB3 256 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 ZNF724A8MTY0 619 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 MS4A18H0YCH9 400 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 PLGP00747 810 aaPredicted RBP15.12■□□□□ 0.01
COL7A1-202ENST00000422991 FPR3P25089 353 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 CTSSP25774 331 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 AGTR1P30556 359 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 GSSP48637 474 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 POU4F3Q15319 338 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 MS4A18Q3C1V0 323 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 TMEM225Q6GV28 225 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 C1orf94Q6P1W5 598 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 SHQ1Q6PI26 577 aaKnown RBP15.12■□□□□ 0.01
COL7A1-202ENST00000422991 GPAT4Q86UL3 456 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 CCDC71Q8IV32 467 aaPredicted RBP15.12■□□□□ 0.01
COL7A1-202ENST00000422991 HS3ST5Q8IZT8 346 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 OR10G2Q8NGC3 310 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 GIPC3Q8TF64 312 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 CENPNQ96H22 339 aaPredicted RBP15.12■□□□□ 0.01
COL7A1-202ENST00000422991 PKP2Q99959 881 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 TACO1Q9BSH4 297 aaKnown RBP15.12■□□□□ 0.01
COL7A1-202ENST00000422991 BDH2Q9BUT1 245 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 SFXN3Q9BWM7 321 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 FANCFQ9NPI8 374 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 TAS2R5Q9NYW4 299 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 EMC3Q9P0I2 261 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 RNF6Q9Y252 685 aa15.12■□□□□ 0.01
COL7A1-202ENST00000422991 TRAV27A0A087WT01 109 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 TNFSF13O75888 250 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 AGFG2O95081 481 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 YES1P07947 543 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 ADORA3P0DMS8 318 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 KIR2DL2P43627 348 aaPredicted RBP15.11■□□□□ 0.01
COL7A1-202ENST00000422991 ELF3P78545 371 aaPredicted RBP15.11■□□□□ 0.01
COL7A1-202ENST00000422991 RPL18Q07020 188 aaKnown RBP15.11■□□□□ 0.01
COL7A1-202ENST00000422991 ZP4Q12836 540 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 ANKDD1AQ495B1 522 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 FAM214BQ7L5A3 538 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 OAFQ86UD1 273 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 TUSC5Q8IXB3 177 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 KDM8Q8N371 416 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 AQP11Q8NBQ7 271 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 OR5K1Q8NHB7 308 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 GNPDA2Q8TDQ7 276 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 NRBF2Q96F24 287 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 OXGR1Q96P68 337 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 DGCR6LQ9BY27 220 aa15.11■□□□□ 0.01
COL7A1-202ENST00000422991 PDP1Q9P0J1 537 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms