RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ZNF432O94892 652 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 IGKV3-15P01624 115 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 BCHEP06276 602 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 NUDT7P0C024 238 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 MYZAPP0CAP1 466 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 PNMTP11086 282 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 HLA-DOBP13765 273 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 IFNGR1P15260 489 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 CBR1P16152 277 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 NCF2P19878 526 aaPredicted RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 NPR2P20594 1047 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 ALDH3B1P43353 468 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 CAPZA2P47755 286 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 RPL14P50914 215 aaKnown RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 CHN2P52757 468 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 SEC24CP53992 1094 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 CLNS1AP54105 237 aaKnown RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 AQP5P55064 265 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 CDH15P55291 814 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 IL1RL1Q01638 556 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 EGR4Q05215 589 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 PIGFQ07326 219 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 RIN1Q13671 783 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 MAD2L1BPQ15013 274 aaPredicted RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 GSTA3Q16772 222 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 CEACAM16Q2WEN9 425 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 ELFN2Q5R3F8 820 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 WBP2NLQ6ICG8 309 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 THSD4Q6ZMP0 1018 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 ABHD12BQ7Z5M8 362 aaPredicted RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 LRRC34Q8IZ02 419 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 ZNF786Q8N393 782 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 RIBC1Q8N443 379 aaPredicted RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 RFLNBQ8N5W9 214 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 ZNF540Q8NDQ6 660 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 NUP37Q8NFH4 326 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 OR4F15Q8NGB8 312 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 MAGEE2Q8TD90 523 aaPredicted RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 UBASH3BQ8TF42 649 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 SLC38A5Q8WUX1 472 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 CKAP2Q8WWK9 683 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 OIT3Q8WWZ8 545 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 TAAR8Q969N4 342 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 VPS33AQ96AX1 596 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 EMC6Q9BV81 110 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 MRPL37Q9BZE1 423 aaKnown RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 METTL17Q9H7H0 456 aaPredicted RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 CRLF2Q9HC73 371 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 DYNLRB1Q9NP97 96 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 MYOZ1Q9NP98 299 aaPredicted RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 OBP2BQ9NPH6 170 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 AIG1Q9NVV5 245 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 MYEF2Q9P2K5 600 aaKnown RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 B3GAT1Q9P2W7 334 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 RAP2CQ9Y3L5 183 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 MALRD1Q5VYJ5 2156 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 MEGF8Q7Z7M0 2845 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 CMYA5Q8N3K9 4069 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 M0R082 166 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 M0R3G1 203 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 SDHDO14521 159 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 PDE5AO76074 875 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 SNUPNO95149 360 aaKnown RBP6.98□□□□□ -1.29
VIM-202ENST00000421459 HPRP00739 348 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 HLA-HP01893 362 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 HPXP02790 462 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 UQCRBP14927 111 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 EPHA3P29320 983 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 CRATP43155 626 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 MAP2K6P52564 334 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 COPZ1P61923 177 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 SNTB2Q13425 540 aaKnown RBP6.98□□□□□ -1.29
VIM-202ENST00000421459 DAG1Q14118 895 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 GNA13Q14344 377 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 ALKBH6Q3KRA9 238 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 LIN52Q52LA3 116 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 C12orf54Q6X4T0 127 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 DEF8Q6ZN54 512 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 COMTD1Q86VU5 262 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 MEX3DQ86XN8 651 aaKnown RBP6.98□□□□□ -1.29
VIM-202ENST00000421459 HOMEZQ8IX15 550 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 PEX5LQ8IYB4 626 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 CLDND2Q8NHS1 167 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 ZNF417Q8TAU3 575 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 NEU4Q8WWR8 484 aaPredicted RBP6.98□□□□□ -1.29
VIM-202ENST00000421459 MAL2Q969L2 176 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 YIPF5Q969M3 257 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 TMEM19Q96HH6 336 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 TXNDC15Q96J42 360 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 ZIM3Q96PE6 472 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 OR2M2Q96R28 347 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 ZNF587Q96SQ5 575 aaPredicted RBP6.98□□□□□ -1.29
VIM-202ENST00000421459 SYT3Q9BQG1 590 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 LINC00470Q9BZP3 86 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 ROPN1BQ9BZX4 212 aaPredicted RBP6.98□□□□□ -1.29
VIM-202ENST00000421459 ZNF442Q9H7R0 627 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 MEAF6Q9HAF1 191 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 ROPN1Q9HAT0 212 aaPredicted RBP6.98□□□□□ -1.29
VIM-202ENST00000421459 TREM2Q9NZC2 230 aa6.98□□□□□ -1.29
VIM-202ENST00000421459 RASD1Q9Y272 281 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms