RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 NUFIP1Q9UHK0 495 aaKnown RBP9.98□□□□□ -0.81
DDX56-203ENST00000421223 MRTO4Q9UKD2 239 aaKnown RBP9.98□□□□□ -0.81
DDX56-203ENST00000421223 TMA7Q9Y2S6 64 aaKnown RBP9.98□□□□□ -0.81
DDX56-203ENST00000421223 CACNA1EQ15878 2313 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 MEIOCA2RUB1 952 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 PLA2G10O15496 165 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 MTRF1O75570 445 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 EIF4EP06730 217 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 ACTC1P68032 377 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 ACTA1P68133 377 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 SIRPAP78324 504 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 ELAVL1Q15717 326 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.97□□□□□ -0.81
DDX56-203ENST00000421223 WDR45BQ5MNZ6 344 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 SFXN4Q6P4A7 337 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 TMPRSS9Q7Z410 1059 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 OR4M1Q8NGD0 313 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 OR6N2Q8NGY6 317 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 C1orf216Q8TAB5 229 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 TRMT10AQ8TBZ6 339 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 HSD17B8Q92506 261 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 HOXB13Q92826 284 aaPredicted RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 ZNF285Q96NJ3 590 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 OR6C1Q96RD1 312 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 PELOQ9BRX2 385 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 SYT4Q9H2B2 425 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 NPAP1Q9NZP6 1156 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 NCDNQ9UBB6 729 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 TEKT2Q9UIF3 430 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 POLHQ9Y253 713 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 SIT1Q9Y3P8 196 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 SDK2Q58EX2 2172 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 SOX1O00570 391 aaPredicted RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 EEF1E1O43324 174 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 NUDT21O43809 227 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 CFIP05156 583 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 KIR2DL3P43628 341 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 CLDN12P56749 244 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 MRPS15P82914 257 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 CD83Q01151 205 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 IFITM2Q01629 132 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 EGR4Q05215 589 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 RPL18Q07020 188 aaKnown RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 QPRTQ15274 297 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 ZNF74Q16587 644 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 GUSBP11Q6P575 273 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 PAMR1Q6UXH9 720 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 KANSL1Q7Z3B3 1105 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 CMIPQ8IY22 773 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 UBQLNLQ8IYU4 475 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 FAM181AQ8N9Y4 354 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 OR7G1Q8NGA0 311 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 PIGKQ92643 395 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 ZNF578Q96N58 590 aaPredicted RBP9.97□□□□□ -0.81
DDX56-203ENST00000421223 COQ7Q99807 217 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 ADAM30Q9UKF2 790 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 SLC6A5Q9Y345 797 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 PCDHGB2Q9Y5G2 931 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 PCNX3Q9H6A9 2034 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 DMDP11532 3685 aa9.97□□□□□ -0.81
DDX56-203ENST00000421223 PLPP2O43688 288 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 OR2T7P0C7T2 308 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 PNMTP11086 282 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 RAB3BP20337 219 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 ABCD3P28288 659 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 DIO1P49895 249 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 PRPS1P60891 318 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 GPR50Q13585 617 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 EBPQ15125 230 aaKnown RBP9.96□□□□□ -0.81
DDX56-203ENST00000421223 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.96□□□□□ -0.81
DDX56-203ENST00000421223 TBRG1Q3YBR2 411 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 ATG4DQ86TL0 474 aaPredicted RBP9.96□□□□□ -0.81
DDX56-203ENST00000421223 YIPF7Q8N8F6 280 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 SLC38A9Q8NBW4 561 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 OR4D9Q8NGE8 314 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 OR5H6Q8NGV6 325 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 OR2T27Q8NH04 317 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 LILRB1Q8NHL6 650 aaPredicted RBP9.96□□□□□ -0.81
DDX56-203ENST00000421223 STT3BQ8TCJ2 826 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 DACT3Q96B18 629 aaPredicted RBP9.96□□□□□ -0.81
DDX56-203ENST00000421223 C8orf44Q96CB5 159 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 MMP25Q9NPA2 562 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 NRIP3Q9NQ35 241 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 RXFP3Q9NSD7 469 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 KLHL21Q9UJP4 597 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 ICAM5Q9UMF0 924 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 VDAC3Q9Y277 283 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 NCOR1O75376 2440 aa9.96□□□□□ -0.81
DDX56-203ENST00000421223 A0A1B0GX78 115 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 BLACEA4D250 179 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 GDF9O60383 454 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 CD14P08571 375 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 HTR3AP46098 478 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 SRP9P49458 86 aaKnown RBP9.96□□□□□ -0.82
DDX56-203ENST00000421223 ACSM1Q08AH1 577 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 CCDC157Q569K6 752 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 HES5Q5TA89 166 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 DPY19L4Q7Z388 723 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 C17orf82Q86X59 251 aaPredicted RBP9.96□□□□□ -0.82
DDX56-203ENST00000421223 SERPINA12Q8IW75 414 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms