RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ATG4DQ86TL0 474 aaPredicted RBP15.85■□□□□ 0.13
VCP-202ENST00000417448 CARM1Q86X55 608 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 RBM15BQ8NDT2 890 aaKnown RBP15.85■□□□□ 0.13
VCP-202ENST00000417448 TNFRSF13CQ96RJ3 184 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 PLA2G12AQ9BZM1 189 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 SHARPINQ9H0F6 387 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 SPAG4Q9NPE6 437 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 DYSFO75923 2080 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 TGP01266 2768 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 GJE1A6NN92 205 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 ZNF814B7Z6K7 855 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 SULT2B1O00204 365 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 SSX4O60224 188 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 ZNF682O95780 498 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 CD8AP01732 235 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 ZNF16P17020 682 aaPredicted RBP15.84■□□□□ 0.13
VCP-202ENST00000417448 HTR3AP46098 478 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 DIO1P49895 249 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 ZNF239Q16600 458 aaKnown RBP15.84■□□□□ 0.13
VCP-202ENST00000417448 TMPPEQ6ZT21 453 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 TRPM8Q7Z2W7 1104 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 PGAM4Q8N0Y7 254 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 ABHD3Q8WU67 409 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 HS6ST2Q96MM7 605 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 MCTS1Q9ULC4 181 aaKnown RBP15.84■□□□□ 0.13
VCP-202ENST00000417448 AP3M1Q9Y2T2 418 aa15.84■□□□□ 0.13
VCP-202ENST00000417448 RAMP1O60894 148 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 SERPINA1P01009 418 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 THY1P04216 161 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 CDH12P55289 794 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 NCALDP61601 193 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 CEACAM7Q14002 265 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 ZNF672Q499Z4 452 aaPredicted RBP15.83■□□□□ 0.12
VCP-202ENST00000417448 ENTPD8Q5MY95 495 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 NCMAPQ5T1S8 102 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 IL17RELQ6ZVW7 336 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 FCRLAQ7L513 359 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 CCDC103Q8IW40 242 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 BHLHE22Q8NFJ8 381 aaPredicted RBP15.83■□□□□ 0.12
VCP-202ENST00000417448 KBTBD8Q8NFY9 601 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 OR10H5Q8NGA6 315 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 OR6K3Q8NGY3 331 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 PROX1Q92786 737 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 FAM162AQ96A26 154 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 RHNO1Q9BSD3 238 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 TRAF4Q9BUZ4 470 aaPredicted RBP15.83■□□□□ 0.12
VCP-202ENST00000417448 TRIM2Q9C040 744 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 PCDHAC1Q9H158 963 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 TMEM27Q9HBJ8 222 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 KLHL13Q9P2N7 655 aa15.83■□□□□ 0.12
VCP-202ENST00000417448 SPIN1Q9Y657 262 aaPredicted RBP15.83■□□□□ 0.12
VCP-202ENST00000417448 PLCE1Q9P212 2302 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 ELOA3DA6NLF2 546 aaPredicted RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 SMAD9O15198 467 aaKnown RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 SPRY1O43609 319 aaPredicted RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 SRD5A1P18405 259 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 GGT1P19440 569 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 FUT4P22083 530 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 CBLP22681 906 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 YAP1P46937 504 aaKnown RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 RAC3P60763 192 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 LOXL1Q08397 574 aaPredicted RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 ELOA3BQ3SY89 546 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 ALG10BQ5I7T1 473 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 GLYATQ6IB77 296 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 C16orf89Q6UX73 402 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 DEF8Q6ZN54 512 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 RANBP3LQ86VV4 465 aaPredicted RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 ELOA3Q8NG57 546 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 SLC25A43Q8WUT9 341 aaPredicted RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 SLC35B4Q969S0 331 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 DDIT4LQ96D03 193 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 ESRP2Q9H6T0 727 aaKnown RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 BARX1Q9HBU1 254 aaPredicted RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 TIGARQ9NQ88 270 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 TESQ9UGI8 421 aaKnown RBP15.82■□□□□ 0.12
VCP-202ENST00000417448 CD300AQ9UGN4 299 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 SNX13Q9Y5W8 968 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 V9GYQ6 96 aa15.82■□□□□ 0.12
VCP-202ENST00000417448 ZNF208O43345 1280 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 PDE5AO76074 875 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 LYPD3O95274 346 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 IGFBP5P24593 272 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 RPS5P46782 204 aaKnown RBP15.81■□□□□ 0.12
VCP-202ENST00000417448 SELENOWP63302 87 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 EGR4Q05215 589 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 OR7A5Q15622 319 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 WDR88Q6ZMY6 472 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 FAM86B1Q8N7N1 296 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 LSMEM1Q8N8F7 131 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 CPNE4Q96A23 557 aaPredicted RBP15.81■□□□□ 0.12
VCP-202ENST00000417448 S100PBPQ96BU1 408 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 SLC25A36Q96CQ1 311 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 KTI12Q96EK9 354 aaPredicted RBP15.81■□□□□ 0.12
VCP-202ENST00000417448 CLPTM1LQ96KA5 538 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 OR10A4Q9H209 315 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 C12orf49Q9H741 205 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 BAG5Q9UL15 447 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 GPR52Q9Y2T5 361 aa15.81■□□□□ 0.12
VCP-202ENST00000417448 EMC9Q9Y3B6 208 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms