RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 C10orf111Q8N326 155 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 KDM8Q8N371 416 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 MAGEE2Q8TD90 523 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 KTI12Q96EK9 354 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 ZNF317Q96PQ6 595 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 RSPO3Q9BXY4 272 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 EVA1AQ9H8M9 152 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 INTS9Q9NV88 658 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 SELENONQ9NZV5 590 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 RCE1Q9Y256 329 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 HMGB1P1B2RPK0 211 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 H7C417 338 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 UPK3AO75631 287 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 SERPINB7O75635 380 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 HTR2AP28223 471 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 SH3BGRP55822 239 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 UBE2NP61088 152 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 C1DQ13901 141 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 MFSD13AQ14CX5 517 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 ALG10BQ5I7T1 473 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 FAM91A1Q658Y4 838 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 HMBOX1Q6NT76 420 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 ULK3Q6PHR2 472 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 ANKK1Q8NFD2 765 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 OR10H5Q8NGA6 315 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 STON2Q8WXE9 905 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 BCL2L2Q92843 193 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 TAAR8Q969N4 342 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 SLC47A1Q96FL8 570 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 ALKBH3Q96Q83 286 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 SLC38A2Q96QD8 506 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 KCNS3Q9BQ31 491 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 TMEM27Q9HBJ8 222 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 TESQ9UGI8 421 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 SLC13A4Q9UKG4 626 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 MOKQ9UQ07 419 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 PMF1-BGLAPU3KQ54 211 aa15.36■□□□□ 0.05
PDLIM2-208ENST00000416159 TRAV36DV7A0A075B6V5 113 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 ARPC4-TTLL3A0A0A6YYG9 625 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 LOC102725191A0A1B0GVB3 256 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 ATP6V1G2-DDX39BF2Z307 99 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 RPL36A-HNRNPH2H7BZ11 118 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 TLX2O43763 284 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 TPST1O60507 370 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 CRLF1O75462 422 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 ZNF432O94892 652 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 NCALDP61601 193 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 LGALS3BPQ08380 585 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 C3orf36Q3SXR2 165 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 RUNDC3AQ59EK9 446 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 ANKRD16Q6P6B7 361 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 CLEC2AQ6UVW9 174 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 DLEU7Q6UYE1 221 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 H1FNTQ75WM6 255 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 LINGO2Q7L985 606 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 HIPK4Q8NE63 616 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 OR6S1Q8NH40 331 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 CKAP2Q8WWK9 683 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 IKZF5Q9H5V7 419 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 MOV10Q9HCE1 1003 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 B3GAT1Q9P2W7 334 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 LEF1Q9UJU2 399 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 ANGPT4Q9Y264 503 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 ZANQ9Y493 2812 aa15.35■□□□□ 0.05
PDLIM2-208ENST00000416159 CHD3Q12873 2000 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 M0R082 166 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 AKAP8O43823 692 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 CD5LO43866 347 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 SLC43A1O75387 559 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 GRPRP30550 384 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 RGS8P57771 180 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 ROR2Q01974 943 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 OR1Q1Q15612 314 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 ADRM1Q16186 407 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 GLIPR1L2Q4G1C9 344 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 HDXQ7Z353 690 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 COMTD1Q86VU5 262 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 ARMC8Q8IUR7 673 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 ADPRHL1Q8NDY3 354 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 ZNF417Q8TAU3 575 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 RNF217Q8TC41 542 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 MAGEB18Q96M61 343 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 ZNF587Q96SQ5 575 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 EPYCQ99645 322 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 CPPED1Q9BRF8 314 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 KATNB1Q9BVA0 655 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 PRR14Q9BWN1 585 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 CRNNQ9UBG3 495 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 SEC14L4Q9UDX3 406 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 ARFGEF3Q5TH69 2177 aa15.34■□□□□ 0.05
PDLIM2-208ENST00000416159 SONP18583 2426 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 IGKV1D-42A0A075B6H8 117 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 IGHV4-30-2A0A087WSY4 118 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 A0A087WUJ7 227 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 A0A0B4J2E0 115 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 IGHV1-18A0A0C4DH31 117 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 A0A1B0GX12 115 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 CRYAAP02489 173 aa15.33■□□□□ 0.04
PDLIM2-208ENST00000416159 EFNA4P52798 201 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms