RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 BAG5Q9UL15 447 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 A0A1W2PNR3 127 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 KLF4O43474 513 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 FESP07332 822 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 LYNP07948 512 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 TFPIP10646 304 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 CLK1P49759 484 aaKnown RBP18.17■□□□□ 0.5
PTPRU-203ENST00000415600 ITGADQ13349 1161 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 MAPK11Q15759 364 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 IQCCQ4KMZ1 466 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 IFI44LQ53G44 452 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 SYT14P1Q58G82 188 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 AP1ARQ63HQ0 302 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 TMPPEQ6ZT21 453 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 NUFIP2Q7Z417 695 aaKnown RBP18.17■□□□□ 0.5
PTPRU-203ENST00000415600 GRINAQ7Z429 371 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 GALNT5Q7Z7M9 940 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 MAGEE2Q8TD90 523 aaPredicted RBP18.17■□□□□ 0.5
PTPRU-203ENST00000415600 TFAP2CQ92754 450 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 PMM1Q92871 262 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 TMEM19Q96HH6 336 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 TRNT1Q96Q11 434 aaKnown RBP18.17■□□□□ 0.5
PTPRU-203ENST00000415600 BATF3Q9NR55 127 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 P2RX2Q9UBL9 471 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 ZNF469Q96JG9 3925 aaPredicted RBP18.16■□□□□ 0.5
PTPRU-203ENST00000415600 ROS1P08922 2347 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 TMEM247A6NEH6 219 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 ZNF724A8MTY0 619 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 hCG_2039718K7EN88 272 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 CYTIPO60759 359 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 CNOT4O95628 575 aaKnown RBP18.16■□□□□ 0.5
PTPRU-203ENST00000415600 OPN1SWP03999 348 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 DIO1P49895 249 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 ALKBH2Q6NS38 261 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 UGT2A3Q6UWM9 527 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 Q6ZT83 130 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 HIPK1Q86Z02 1210 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 ARMC8Q8IUR7 673 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 ZNF100Q8IYN0 542 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 FAM71CQ8NEG0 241 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 CNBD2Q96M20 576 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 ADI1Q9BV57 179 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 POTEKPQ9BYX7 375 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 ANKRD60Q9BZ19 345 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 QRSL1Q9H0R6 528 aaKnown RBP18.16■□□□□ 0.5
PTPRU-203ENST00000415600 USE1Q9NZ43 259 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 CHRNA9Q9UGM1 479 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 KCNE5Q9UJ90 142 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 HDGFL3Q9Y3E1 203 aa18.16■□□□□ 0.5
PTPRU-203ENST00000415600 DNPH1O43598 174 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 PGM3O95394 542 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 ADAP00813 363 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 ALPLP05186 524 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 LOXP28300 417 aaPredicted RBP18.15■□□□□ 0.5
PTPRU-203ENST00000415600 RYKP34925 604 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 OR3A2P47893 321 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 OTUD3Q5T2D3 398 aaPredicted RBP18.15■□□□□ 0.5
PTPRU-203ENST00000415600 SHQ1Q6PI26 577 aaKnown RBP18.15■□□□□ 0.5
PTPRU-203ENST00000415600 FRRS1Q6ZNA5 592 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 C22orf34Q6ZV56 151 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 CARM1Q86X55 608 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 PERPQ96FX8 193 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 RDH12Q96NR8 316 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 PSD2Q9BQI7 771 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 OSBPL10Q9BXB5 764 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 GSX2Q9BZM3 304 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 CACYBPQ9HB71 228 aaKnown RBP18.15■□□□□ 0.5
PTPRU-203ENST00000415600 UBAP1Q9NZ09 502 aa18.15■□□□□ 0.5
PTPRU-203ENST00000415600 IGHV3-15A0A0B4J1V0 119 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 HS3ST1O14792 307 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 E2F6O75461 281 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 H6PDO95479 791 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 MAP2K6P52564 334 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 CHN2P52757 468 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 PPP2R2BQ00005 443 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 RPS26P11Q5JNZ5 115 aaPredicted RBP18.14■□□□□ 0.49
PTPRU-203ENST00000415600 BHLHA15Q7RTS1 189 aaPredicted RBP18.14■□□□□ 0.49
PTPRU-203ENST00000415600 TMEM179BQ7Z7N9 219 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF611Q8N823 705 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 GEMIN6Q8WXD5 167 aaKnown RBP18.14■□□□□ 0.49
PTPRU-203ENST00000415600 MUCL1Q96DR8 90 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 NRBF2Q96F24 287 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 RBM4BQ9BQ04 359 aaKnown RBP18.14■□□□□ 0.49
PTPRU-203ENST00000415600 RBM4Q9BWF3 364 aaKnown RBP18.14■□□□□ 0.49
PTPRU-203ENST00000415600 GABARAPL1Q9H0R8 117 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 MTHFD2LQ9H903 347 aaPredicted RBP18.14■□□□□ 0.49
PTPRU-203ENST00000415600 VNN3Q9NY84 501 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 RNF115Q9Y4L5 304 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 MAGED1Q9Y5V3 778 aaPredicted RBP18.14■□□□□ 0.49
PTPRU-203ENST00000415600 DSCAMO60469 2012 aa18.14■□□□□ 0.49
PTPRU-203ENST00000415600 NIPBLQ6KC79 2804 aaeCLIP18.14■□□□□ 0.49
PTPRU-203ENST00000415600 PRAMEF27A3QJZ7 478 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 GPR171O14626 319 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 CD3EP07766 207 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 NR2F1P10589 423 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 CHRNEQ04844 493 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 MAPK14Q16539 360 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 SLC36A3Q495N2 470 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 P2RY8Q86VZ1 359 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 PIGXQ8TBF5 258 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms