RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 SHEQ5VZ18 495 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 TTC33Q6PID6 262 aaPredicted RBP9.86□□□□□ -0.83
RFFL-204ENST00000414419 TMEM108Q6UXF1 575 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 SPATA21Q7Z572 469 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ARPINQ7Z6K5 226 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ALPK2Q86TB3 2170 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 CALHM3Q86XJ0 350 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 EPHX4Q8IUS5 362 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 LRRC75A-AS1Q8N1F1 130 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 DEPDC4Q8N2C3 294 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 PIAS4Q8N2W9 510 aaPredicted RBP9.86□□□□□ -0.83
RFFL-204ENST00000414419 C17orf78Q8N4C9 275 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ZNF611Q8N823 705 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 C1orf162Q8NEQ5 155 aaPredicted RBP9.86□□□□□ -0.83
RFFL-204ENST00000414419 OR2T12Q8NG77 320 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 GPR32P1Q8NGA4 272 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 OR6S1Q8NH40 331 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ZNF417Q8TAU3 575 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ZNF583Q96ND8 569 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ZNF587Q96SQ5 575 aaPredicted RBP9.86□□□□□ -0.83
RFFL-204ENST00000414419 ELAC2Q9BQ52 826 aaKnown RBP9.86□□□□□ -0.83
RFFL-204ENST00000414419 WFDC6Q9BQY6 131 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 TMEM204Q9BSN7 226 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 TMEM43Q9BTV4 400 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 FAM107BQ9H098 131 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 NSRP1Q9H0G5 558 aaKnown RBP9.86□□□□□ -0.83
RFFL-204ENST00000414419 CXorf56Q9H5V9 222 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 EFCAB1Q9HAE3 211 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 MGAT4BQ9UQ53 548 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 AMDHD2Q9Y303 409 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 SH3GLB1Q9Y371 365 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 MAGED1Q9Y5V3 778 aaPredicted RBP9.86□□□□□ -0.83
RFFL-204ENST00000414419 USF3Q68DE3 2245 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 TRAPPC13A5PLN9 417 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 FAM220BPB1ANY3 271 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 PDLIM1O00151 329 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 ABCD4O14678 606 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 TMCC2O75069 709 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 SLC43A1O75387 559 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 OR6A2O95222 327 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 WNT11O96014 354 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 COX4I1P13073 169 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 PTNP21246 168 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 AHCYP23526 432 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 PTAFRP25105 342 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 ZNF83P51522 516 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 FOXG1P55316 489 aaPredicted RBP9.85□□□□□ -0.83
RFFL-204ENST00000414419 PRPS1P60891 318 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 PMS2P3Q13401 168 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 LRRC23Q53EV4 343 aaPredicted RBP9.85□□□□□ -0.83
RFFL-204ENST00000414419 C1QTNF12Q5T7M4 302 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 HMBOX1Q6NT76 420 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 ADAM5Q6NVV9 412 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 CPLX4Q7Z7G2 160 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 RBM45Q8IUH3 476 aaKnown RBP9.85□□□□□ -0.83
RFFL-204ENST00000414419 UEVLDQ8IX04 471 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 GPR137CQ8N3F9 429 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 SCAIQ8N9R8 606 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 ADAMTS16Q8TE57 1224 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 MPP4Q96JB8 637 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 RADILQ96JH8 1075 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 C1QTNF6Q9BXI9 259 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 SEC14L4Q9UDX3 406 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 POU2F3Q9UKI9 436 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 SLC7A7Q9UM01 511 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 LAMP3Q9UQV4 416 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 RCE1Q9Y256 329 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 SLC25A15Q9Y619 301 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 PLCE1Q9P212 2302 aa9.85□□□□□ -0.83
RFFL-204ENST00000414419 ELOVL7A1L3X0 281 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 M0R1B8 84 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 GSTA4O15217 222 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 MT-ATP6P00846 226 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 BGLAPP02818 100 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 HIST1H2ABP04908 130 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 IFNA8P32881 189 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 SEC24CP53992 1094 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 TAS2R41P59536 307 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 UBE2NP61088 152 aaKnown RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 RPS4XP62701 263 aaKnown RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 FOXD4Q12950 439 aaPredicted RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 NPTX1Q15818 432 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 ZNF672Q499Z4 452 aaPredicted RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 Q5PR19 223 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 SLC22A25Q6T423 547 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 DEF8Q6ZN54 512 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 HIST3H2AQ7L7L0 130 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 CARM1Q86X55 608 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 MICU2Q8IYU8 434 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 ADPRHL1Q8NDY3 354 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 PIK3C3Q8NEB9 887 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 WFDC11Q8NEX6 87 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 KBTBD8Q8NFY9 601 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 SMAP2Q8WU79 429 aaPredicted RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 LZICQ8WZA0 190 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 HIST1H2ACQ93077 130 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 GTPBP3Q969Y2 492 aaKnown RBP9.84□□□□□ -0.83
RFFL-204ENST00000414419 CMTM5Q96DZ9 223 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 PERPQ96FX8 193 aa9.84□□□□□ -0.83
RFFL-204ENST00000414419 TPD52L3Q96J77 140 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms