RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 RAB6CQ9H0N0 254 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 NT5DC2Q9H857 520 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZDHHC11Q9H8X9 412 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CNOT10Q9H9A5 744 aaKnown RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 DNAJC4Q9NNZ3 241 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 TM7SF3Q9NS93 570 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 DNAJC11Q9NVH1 559 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 MED29Q9NX70 200 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 STEAP1Q9UHE8 339 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 FBXL3Q9UKT7 428 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SCML1Q9UN30 329 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 IFT52Q9Y366 437 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 PKP3Q9Y446 797 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 SCN10AQ9Y5Y9 1956 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ANK1P16157 1881 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 TANC1Q9C0D5 1861 aa-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZCCHC6Q5VYS8 1495 aaKnown RBP-2.07□□□□□ -2.74
RNU4-88P-201ENST00000411220 CDH23Q9H251 3354 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 C11orf97A0A1B0GVM6 126 aaPredicted RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 DDTLA6NHG4 134 aaPredicted RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC38A8A6NNN8 435 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 H3BQ85 93 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 MAP2K7O14733 419 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 PIP5K1BO14986 540 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 GLRA3O75311 464 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 UBXN7O94888 489 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 JCHAINP01591 159 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 APCSP02743 223 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 MMP10P09238 476 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 P4HA1P13674 534 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ALOX5APP20292 161 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 NTF3P20783 257 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ATP6V1B2P21281 511 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 DRD5P21918 477 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 FOXN2P32314 431 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ICAM3P32942 547 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 COPB2P35606 906 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 DDIT3P35638 169 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 CDKN2BP42772 138 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 NAMPTP43490 491 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 GPR12P47775 334 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR1E2P47887 323 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 NOVA1P51513 510 aaKnown RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 UCP2P55851 309 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 OLR1P78380 273 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 IL1RL1Q01638 556 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZNF90Q03938 601 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 RPL18Q07020 188 aaKnown RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 NIPAL4Q0D2K0 466 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 MFAP5Q13361 173 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 KNOP1Q1ED39 458 aaKnown RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 Q1T7F1 81 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 DEFB113Q30KQ7 82 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC36A2Q495M3 483 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TMEM155Q4W5P6 130 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TEX30Q5JUR7 227 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 RBM48Q5RL73 367 aaKnown RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC9C2Q5TAH2 1124 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 LCN1P1Q5VSP4 162 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ARMC3Q5W041 872 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 FAM205BPQ63HN1 556 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TTC27Q6P3X3 843 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TMEM270Q6UE05 265 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ABRAXAS1Q6UWZ7 409 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 SYT10Q6XYQ8 523 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 FRA10AC1Q70Z53 315 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC36A1Q7Z2H8 476 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TRMT11Q7Z4G4 463 aaKnown RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 HSD11B1LQ7Z5J1 315 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 GALNT10Q86SR1 603 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TTC30AQ86WT1 665 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 NBPF5PQ86XG9 351 aaPredicted RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 KLBQ86Z14 1044 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 GPALPP1Q8IXQ4 340 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TBC1D21Q8IYX1 336 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC22A15Q8IZD6 547 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 GTPBP8Q8N3Z3 284 aaPredicted RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ARL14Q8N4G2 192 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 C12orf45Q8N5I9 185 aaPredicted RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TMEM217Q8N7C4 229 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 RASGEF1AQ8N9B8 481 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 SETD9Q8NE22 299 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 NOXO1Q8NFA2 376 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 GJC3Q8NFK1 279 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR10S1Q8NGN2 331 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR1J1Q8NGS3 322 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR5R1Q8NH85 324 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ETNPPLQ8TBG4 499 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 DNAJB14Q8TBM8 379 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 PPP4R1Q8TF05 950 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 CHURC1Q8WUH1 139 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 TNFAIP8L1Q8WVP5 186 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 HDAC10Q969S8 669 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 PTX4Q96A99 478 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 EEF1AKMT3Q96AZ1 226 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 MRPL38Q96DV4 380 aaKnown RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 CCDC97Q96F63 343 aaPredicted RBP-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 VPS35Q96QK1 796 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 ACOX2Q99424 681 aa-2.08□□□□□ -2.74
RNU4-88P-201ENST00000411220 GPER1Q99527 375 aa-2.08□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms