RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TFGQ92734 400 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CPNE4Q96A23 557 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SLCO4A1Q96BD0 722 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZHX1-C8orf76Q96EF9 292 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 DAZAP1Q96EP5 407 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 WBP1Q96G27 269 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 MRPL48Q96GC5 212 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 HRASLS5Q96KN8 279 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF583Q96ND8 569 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 LRFN5Q96NI6 719 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 IL17FQ96PD4 163 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CSF3RQ99062 836 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SPAG8Q99932 426 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 NAT9Q9BTE0 207 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 MRPL37Q9BZE1 423 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 NXF2Q9GZY0 626 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SIRPDQ9H106 197 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SPNS1Q9H2V7 528 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 C12orf65Q9H3J6 166 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 KIR3DX1Q9H7L2 352 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 MLXIPLQ9NP71 852 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF275Q9NSD4 429 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 UFSP2Q9NUQ7 469 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 OCIAD1Q9NX40 245 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CMTM6Q9NX76 183 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ARL15Q9NXU5 204 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SPHK1Q9NYA1 384 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 OR6C2Q9NZP2 312 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CTSFQ9UBX1 484 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 BTNL2Q9UIR0 455 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ICKQ9UPZ9 632 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 GAB2Q9UQC2 676 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ASF1AQ9Y294 204 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 TRAPPC4Q9Y296 219 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 PCDHGB1Q9Y5G3 927 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 PIKFYVEQ9Y2I7 2098 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 USP24Q9UPU5 2620 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CROCCQ5TZA2 2017 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 UNC13CQ8NB66 2214 aa4.15□□□□□ -1.74
SF3B1-202ENST00000409915 EPG5Q9HCE0 2579 aa4.15□□□□□ -1.74
SF3B1-202ENST00000409915 DSPP15924 2871 aaKnown RBP4.15□□□□□ -1.74
SF3B1-202ENST00000409915 IGHV5-51A0A0C4DH38 117 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 LOC100506127A0A0U1RQW1 187 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 RPS10-NUDT3A0A1W2PQS6 291 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ANKRD61A6NGH8 418 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ARHGEF33A8MVX0 844 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 KRBOX1C9JBD0 128 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 E7ENX8 843 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 F5H697 171 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 H0YIG0 161 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 DLGAP1O14490 977 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SPRY2O43597 315 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 KLK8O60259 260 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SNNO75324 88 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SCO1O75880 301 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 TNFSF15O95150 251 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ACSL3O95573 720 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 C1QAP02745 245 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FHP07954 510 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FBP1P09467 338 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 MYL2P10916 166 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ITGAMP11215 1152 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FGF3P11487 239 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 FCGR1AP12314 374 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF250P15622 560 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SPI1P17947 270 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 TNNI3P19429 210 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 CBLP22681 906 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 PSMB5P28074 263 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 NDUFS1P28331 727 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 PEBP1P30086 187 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 RPA3P35244 121 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 MC3RP41968 323 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SLC1A3P43003 542 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 CDKN1BP46527 198 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 KPNA2P52292 529 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 LIMK2P53671 638 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 RRADP55042 308 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 OR2B6P58173 313 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 GABARAPL2P60520 117 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 HSD11B2P80365 405 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF45Q02386 682 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 EGR4Q05215 589 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SLC18A2Q05940 514 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 SRSF6Q13247 344 aaKnown RBP4.15□□□□□ -1.75
SF3B1-202ENST00000409915 AQP6Q13520 282 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 IL18Q14116 193 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 GRB7Q14451 532 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 GRK1Q15835 563 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 CTF1Q16619 201 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 DGUOKQ16854 277 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 MICBQ29980 383 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 DEFB110Q30KQ9 67 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 GPAT3Q53EU6 434 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 PABPC1L2AQ5JQF8 200 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 THEM4Q5T1C6 240 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 HECTD2Q5U5R9 776 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 HIST2H2BCQ6DN03 193 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 HIST2H2BDQ6DRA6 164 aa4.15□□□□□ -1.75
SF3B1-202ENST00000409915 XAF1Q6GPH4 301 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms