RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 TRAF4Q9BUZ4 470 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 C1QTNF6Q9BXI9 259 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 LINC00470Q9BZP3 86 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 KLHL14Q9P2G3 628 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 SEC14L4Q9UDX3 406 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 RCE1Q9Y256 329 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 LOC102725191A0A1B0GVB3 256 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 ZNF587BE7ETH6 402 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 M0R082 166 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 FMO6PO60774 539 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 CD8AP01732 235 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 GRPRP30550 384 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 ARFIP2P53365 341 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 SLC25A3Q00325 362 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 CYLC2Q14093 348 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 MFSD13AQ14CX5 517 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 DUSP7Q16829 419 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 TRMT5Q32P41 509 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 SLC22A25Q6T423 547 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 CLEC9AQ6UXN8 241 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 H1FNTQ75WM6 255 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 PATL1Q86TB9 770 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 DEPDC4Q8N2C3 294 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 ZNF417Q8TAU3 575 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 RNF217Q8TC41 542 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 ZNF587Q96SQ5 575 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 EPYCQ99645 322 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 OBP2BQ9NPH6 170 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 FGFR1OP2Q9NVK5 253 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 B3GAT1Q9P2W7 334 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 PLCE1Q9P212 2302 aa17.18■□□□□ 0.34
TSPAN4-209ENST00000409543 E7EQL1 145 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 UPK3AO75631 287 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 ZNF432O94892 652 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 WNT11O96014 354 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 CDH2P19022 906 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 PCGF2P35227 344 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 GZMMP51124 257 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 CDH12P55289 794 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 CLDN17P56750 224 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 LGALS3BPQ08380 585 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 SPOCK1Q08629 439 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 ETFDHQ16134 617 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 NRF1Q16656 503 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 AGAP6Q5VW22 663 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 NANOGP8Q6NSW7 305 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 KLHL24Q6TFL4 600 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 ADPRHL1Q8NDY3 354 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 GPR32P1Q8NGA4 272 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 OR1K1Q8NGR3 316 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 OR10A6Q8NH74 314 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 SLC41A3Q96GZ6 507 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 POM121Q96HA1 1249 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 MCHR1Q99705 422 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 SH3GL1Q99961 368 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 DHRS9Q9BPW9 319 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 TMEM43Q9BTV4 400 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 ALG2Q9H553 416 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 NANOGQ9H9S0 305 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 POU2F3Q9UKI9 436 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 CORINQ9Y5Q5 1042 aa17.17■□□□□ 0.34
TSPAN4-209ENST00000409543 M0R3H8 397 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 NPPAP01160 153 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 OPN1SWP03999 348 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 HOXB4P17483 251 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 PAX7P23759 505 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 CDKN1AP38936 164 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 C1DQ13901 141 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 VMACQ2NL98 169 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 HIKESHIQ53FT3 197 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 COQ5Q5HYK3 327 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 INTS11Q5TA45 600 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 CGB2Q6NT52 195 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 ZNF613Q6PF04 617 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 LINGO2Q7L985 606 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 ANKK1Q8NFD2 765 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 ZNF317Q96PQ6 595 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 ALKBH3Q96Q83 286 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 SAR1AQ9NR31 198 aa17.16■□□□□ 0.34
TSPAN4-209ENST00000409543 NSD1Q96L73 2696 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 RPL36A-HNRNPH2H7BZ11 118 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 SMAD7O15105 426 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 SLC43A1O75387 559 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 LY6G6DO95868 133 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 BGLAPP02818 100 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 HEXAP06865 529 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 VIMP08670 466 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 CD247P20963 164 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 CBLP22681 906 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 TTKP33981 857 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 LTBQ06643 244 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 KLF10Q13118 480 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 KRTAP21-3Q3LHN1 58 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 TBRG1Q3YBR2 411 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 HMBOX1Q6NT76 420 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 LINC00114Q6XXX2 140 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 CCDC80Q76M96 950 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 SCAIQ8N9R8 606 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 OR8J3Q8NGG0 315 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 OR6T1Q8NGN1 323 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms