RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ADPRHL2Q9NX46 363 aa6.72□□□□□ -1.33
LSM5-202ENST00000409292 MARCOQ9UEW3 520 aaPredicted RBP6.72□□□□□ -1.33
LSM5-202ENST00000409292 OSGIN1Q9UJX0 560 aa6.72□□□□□ -1.33
LSM5-202ENST00000409292 ZNF346Q9UL40 294 aaKnown RBP6.72□□□□□ -1.33
LSM5-202ENST00000409292 USP22Q9UPT9 525 aa6.72□□□□□ -1.33
LSM5-202ENST00000409292 ARFGEF3Q5TH69 2177 aa6.72□□□□□ -1.33
LSM5-202ENST00000409292 TRAV20A0A0B4J274 112 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 PRSS51A0A1B0GVH4 220 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 A0A1W2PPM1 405 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 AQP7P3A6NL99 342 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 SMIM23A6NLE4 172 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 A8MVM7 634 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 FAAHO00519 579 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 SYNGR3O43761 229 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 ENTPD5O75356 428 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 SLC43A1O75387 559 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 AKR7A3O95154 331 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 AHSA1O95433 338 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 DBIP07108 87 aaKnown RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 MSMBP08118 114 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 ADRA2AP08913 450 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 CECR9P0C854 216 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 SAGP10523 405 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 NR2F1P10589 423 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 ZNF43P17038 809 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 NCF2P19878 526 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 FPR2P25090 351 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 EVX1P49640 407 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 COMPP49747 757 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 CLNS1AP54105 237 aaKnown RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 FOXG1P55316 489 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 CLDN8P56748 225 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 TMEM33P57088 247 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 SLC25A3Q00325 362 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 ROR2Q01974 943 aaKnown RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 POU3F1Q03052 451 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 EMX2Q04743 252 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 LRRC74AQ0VAA2 488 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 NPRL3Q12980 569 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 SNTB2Q13425 540 aaKnown RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 CCNIQ14094 377 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 DAG1Q14118 895 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 DPY19L1Q2PZI1 675 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 SMU1Q2TAY7 513 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 TRMT5Q32P41 509 aaKnown RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 TYW3Q6IPR3 259 aaKnown RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 FAHD2BQ6P2I3 314 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 TNFAIP8L2Q6P589 184 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 USP43Q70EL4 1123 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 ZDHHC13Q8IUH4 622 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 GSPT2Q8IYD1 628 aaKnown RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 BPIFB2Q8N4F0 458 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 KRTCAP2Q8N6L1 136 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 FAM71CQ8NEG0 241 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 FAM216AQ8WUB2 273 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 UBLCP1Q8WVY7 318 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 RDH5Q92781 318 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 FAHD2AQ96GK7 314 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 ZIM3Q96PE6 472 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 ALKBH3Q96Q83 286 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 DOK1Q99704 481 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 LINC00470Q9BZP3 86 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 TUBB1Q9H4B7 451 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 MTHFD2LQ9H903 347 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 CRLF2Q9HC73 371 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 TNFRSF12AQ9NP84 129 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 B3GAT2Q9NPZ5 323 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 HIF1ANQ9NWT6 349 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 CALML5Q9NZT1 146 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 CRNNQ9UBG3 495 aaPredicted RBP6.71□□□□□ -1.34
LSM5-202ENST00000409292 REV1Q9UBZ9 1251 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 FBXL3Q9UKT7 428 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 RCE1Q9Y256 329 aa6.71□□□□□ -1.34
LSM5-202ENST00000409292 NUP214P35658 2090 aaPredicted RBP6.7□□□□□ -1.34
LSM5-202ENST00000409292 A0A096LPE4 126 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 A0A1W2PPZ6 126 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 TMEM72A0PK05 275 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 TMEM89A2RUT3 159 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 LIPT2A6NK58 231 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 EREGO14944 169 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 PPIHO43447 177 aaKnown RBP6.7□□□□□ -1.34
LSM5-202ENST00000409292 VENTXO95231 258 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 KRT75O95678 551 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 MT-ND5P03915 603 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 CHRM4P08173 479 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 G6PDP11413 515 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 IMPDH2P12268 514 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 ACHEP22303 614 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 ECHS1P30084 290 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 NTF4P34130 210 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 THBS4P35443 961 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 MYBPC1Q00872 1141 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 TEKQ02763 1124 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 FOXL1Q12952 345 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 LARS2Q15031 903 aaKnown RBP6.7□□□□□ -1.34
LSM5-202ENST00000409292 FAM174BQ3ZCQ3 159 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 MMEL1Q495T6 779 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 LIN52Q52LA3 116 aa6.7□□□□□ -1.34
LSM5-202ENST00000409292 XKR7Q5GH72 579 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms