RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZP4Q12836 540 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 DAG1Q14118 895 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 MAPK14Q16539 360 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 RFTN2Q52LD8 501 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 ATG16L1Q676U5 607 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 CLEC6AQ6EIG7 209 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 ACSM5Q6NUN0 579 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 FITM2Q8N6M3 262 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 CCNYL1Q8N7R7 359 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 SIGLECL1Q8N7X8 197 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 OR5AK3PQ8NH89 298 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 NANPQ8TBE9 248 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 DVL3Q92997 716 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 LRRC58Q96CX6 371 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 C1orf147Q96MC9 270 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 C7orf26Q96N11 449 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 ZNF350Q9GZX5 532 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 MOV10Q9HCE1 1003 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 REV1Q9UBZ9 1251 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 PCDHGB4Q9UN71 923 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 CMAHPQ9Y471 501 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 ARHGAP32A7KAX9 2087 aa11.03□□□□□ -0.64
CHRNA1-203ENST00000409219 TMED7-TICAM2A0A0A6YYA0 188 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 TMEM72A0PK05 275 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 ZC3H12DA2A288 527 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 DNAJC9-AS1A6NH13 148 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 PLPP2O43688 288 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 PLIN3O60664 434 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 SNNO75324 88 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 DEAF1O75398 565 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 ANPEPP15144 967 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 CBR1P16152 277 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 BGNP21810 368 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 ALDH3B1P43353 468 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 TMEM33P57088 247 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 RPS26P62854 115 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 NPRL3Q12980 569 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 SPDYE7PQ495Y7 208 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 ZNF311Q5JNZ3 666 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 LIPMQ5VYY2 423 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 R3HCC1LQ7Z5L2 792 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 TMEM99Q8N816 258 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 OR7A2PQ8NGA2 310 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 SFXN5Q8TD22 340 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 DDIT4LQ96D03 193 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 SF3B5Q9BWJ5 86 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 SLITRK2Q9H156 845 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 MS4A5Q9H3V2 200 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 ZNF665Q9H7R5 613 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 ATP6V1HQ9UI12 483 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 ZDHHC2Q9UIJ5 367 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 EMCNQ9ULC0 261 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 TMED7Q9Y3B3 224 aa11.02□□□□□ -0.65
CHRNA1-203ENST00000409219 CFAP73A6NFT4 308 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 AQP7P3A6NL99 342 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 J3QLI3 93 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 PIP5K1BO14986 540 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 STX11O75558 287 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 UPK3AO75631 287 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 AKR7A3O95154 331 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 C6orf47O95873 294 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 GSNP06396 782 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 UROSP10746 265 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 LAMP1P11279 417 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 BCKDHAP12694 445 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 FPR2P25090 351 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 EVX1P49640 407 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 NCALDP61601 193 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 IL13RA1P78552 427 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 SF3A3Q12874 501 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 MAD2L1BPQ15013 274 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 DCAF12L2Q5VW00 463 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 FRMD7Q6ZUT3 714 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 GPAT4Q86UL3 456 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 LCA5Q86VQ0 697 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 NUDCD3Q8IVD9 361 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 OR5P2Q8WZ92 322 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 TAF15Q92804 592 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 ZNF416Q9BWM5 594 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 OPN4Q9UHM6 478 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 OSGIN1Q9UJX0 560 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 SLC35A3Q9Y2D2 325 aa11.01□□□□□ -0.65
CHRNA1-203ENST00000409219 H0YHG0 523 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 SLC28A1O00337 649 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 AP3D1O14617 1153 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 ZNF208O43345 1280 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 ATP5HO75947 161 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 AK1P00568 194 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 PROCP04070 461 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 HOXB1P14653 301 aaPredicted RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 HPCAL1P37235 193 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 HTR3AP46098 478 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 IDH2P48735 452 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 SH3BGRP55822 239 aaPredicted RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 BST1Q10588 318 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 ARHGAP11BQ3KRB8 267 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 CCDC153Q494R4 210 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 AVPI1Q5T686 147 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms