RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 IFNA14P01570 189 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 CRYAAP02489 173 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 TP53P04637 393 aaPredicted RBP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 SOD3P08294 240 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 CSF3P09919 207 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 TTKP33981 857 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 CYLC2Q14093 348 aaPredicted RBP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 TRMT5Q32P41 509 aaKnown RBP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 C3orf36Q3SXR2 165 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 HSP90B2PQ58FF3 399 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 RUNDC3AQ59EK9 446 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 COQ5Q5HYK3 327 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 ANKRD16Q6P6B7 361 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 ZNF613Q6PF04 617 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 H1FNTQ75WM6 255 aaPredicted RBP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 UEVLDQ8IX04 471 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 MUC15Q8N387 334 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 LILRB1Q8NHL6 650 aaPredicted RBP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 ZNF385AQ96PM9 386 aaKnown RBP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 ALKBH3Q96Q83 286 aaPredicted RBP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 CGREF1Q99674 301 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 TMEM43Q9BTV4 400 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 GSX1Q9H4S2 264 aaPredicted RBP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 SLC52A3Q9NQ40 469 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 CBLN4Q9NTU7 201 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 SLAMF8Q9P0V8 285 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 CHST2Q9Y4C5 530 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 NOX1Q9Y5S8 564 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 ATP23Q9Y6H3 246 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 PMF1-BGLAPU3KQ54 211 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 NIPBLQ6KC79 2804 aaeCLIP7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 USF3Q68DE3 2245 aa7.97□□□□□ -1.13
SNORD88A-201ENST00000408314 NSD1Q96L73 2696 aaPredicted RBP7.96□□□□□ -1.13
SNORD88A-201ENST00000408314 NAV3Q8IVL0 2385 aa7.96□□□□□ -1.13
SNORD88A-201ENST00000408314 HIVEP2P31629 2446 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 A0A087WUJ7 227 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 ARPC4-TTLL3A0A0A6YYG9 625 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 A0A0B4J2E0 115 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 A0A1B0GX12 115 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 TRIM64A6NGJ6 449 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 TRIM64BA6NI03 449 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 M0R082 166 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 SMAD7O15105 426 aaKnown RBP7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 CHP2O43745 196 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 OR6A2O95222 327 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 AQP1P29972 269 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 GRPRP30550 384 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 PCGF2P35227 344 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 CDKN1AP38936 164 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 SELENOPP49908 381 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 FABP6P51161 128 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 P2RY4P51582 365 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 NUDT6P53370 316 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 CLDN17P56750 224 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 PCBP3P57721 371 aaKnown RBP7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 HOXC5Q00444 222 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 EGR4Q05215 589 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 OR1Q1Q15612 314 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 PGGHGQ32M88 737 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 TBRG1Q3YBR2 411 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 MMEL1Q495T6 779 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 C9orf135Q5VTT2 229 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 ERICH5Q6P6B1 374 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 CLEC2AQ6UVW9 174 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 DLEU7Q6UYE1 221 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 EPHX4Q8IUS5 362 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 C10orf53Q8N6V4 93 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 FAM169BQ8N8A8 192 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 ZIC4Q8N9L1 334 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 WDR31Q8NA23 367 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 PCYOX1LQ8NBM8 494 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 OR1K1Q8NGR3 316 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF417Q8TAU3 575 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 NANOS1Q8WY41 292 aaKnown RBP7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 NEUROG1Q92886 237 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 KTI12Q96EK9 354 aaPredicted RBP7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 MPP4Q96JB8 637 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF587Q96SQ5 575 aaPredicted RBP7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 KATNB1Q9BVA0 655 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 PTDSS2Q9BVG9 487 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 TMEM120AQ9BXJ8 343 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC19A3Q9BZV2 496 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF385DQ9H6B1 395 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 KLHL14Q9P2G3 628 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 FBXL3Q9UKT7 428 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 BAG5Q9UL15 447 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 FKBP7Q9Y680 259 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 CADP27708 2225 aa7.96□□□□□ -1.14
SNORD88A-201ENST00000408314 ABCA2Q9BZC7 2435 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 PLCE1Q9P212 2302 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 A0A1W2PR80 420 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 RPL36A-HNRNPH2H7BZ11 118 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 H7C417 338 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC22A2O15244 555 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 PDE5AO76074 875 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 MFN2O95140 757 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 LY6G6DO95868 133 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 LGI1O95970 557 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 ERCC1P07992 297 aaPredicted RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 CDH2P19022 906 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms