RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CLDN17P56750 224 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 RGS8P57771 180 aaPredicted RBP16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 PRPS1P60891 318 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 ETFDHQ16134 617 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 C11orf71Q6IPW1 123 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 ULK3Q6PHR2 472 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 ARMC8Q8IUR7 673 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 DPP10Q8N608 796 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 SMYD1Q8NB12 490 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 OR1K1Q8NGR3 316 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 ZNF417Q8TAU3 575 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 ANKRD27Q96NW4 1050 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 ZNF587Q96SQ5 575 aaPredicted RBP16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 TRIM33Q9UPN9 1127 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 PRORSD1PA6NEY8 169 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 ANGPT2O15123 496 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 FZD7O75084 574 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 SERPINB7O75635 380 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 ZNF43P17038 809 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 PCSK6P29122 969 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 GRPRP30550 384 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 PCBP3P57721 371 aaKnown RBP16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 OR1Q1Q15612 314 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 FAM69AQ5T7M9 428 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 KLHL24Q6TFL4 600 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 ABHD12BQ7Z5M8 362 aaPredicted RBP16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 DEPDC4Q8N2C3 294 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 MUC15Q8N387 334 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 RNF217Q8TC41 542 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 SLC38A4Q969I6 547 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 BOD1Q96IK1 185 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 HS6ST2Q96MM7 605 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 OXGR1Q96P68 337 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 CGREF1Q99674 301 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 CACNG6Q9BXT2 260 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 KLHL14Q9P2G3 628 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 TESQ9UGI8 421 aaKnown RBP16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 ANGPT4Q9Y264 503 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 ATP23Q9Y6H3 246 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 ARFGEF3Q5TH69 2177 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 TRAV36DV7A0A075B6V5 113 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 A0A0B4J2E0 115 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 A0A1B0GX12 115 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 OR2T1O43869 369 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 ZNF432O94892 652 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 FABP6P51161 128 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 NCALDP61601 193 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 CYP51A1Q16850 503 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 TBRG1Q3YBR2 411 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 FAM91A1Q658Y4 838 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 DNM1P46Q6ZS02 220 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 C11orf65Q8NCR3 313 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 HTRA1Q92743 480 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 BCL2L2Q92843 193 aaPredicted RBP16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 SLC47A1Q96FL8 570 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 TMEM27Q9HBJ8 222 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 CBLN4Q9NTU7 201 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 SLC13A4Q9UKG4 626 aa16.85■□□□□ 0.29
SMARCB1-204ENST00000407422 A0A087WUJ7 227 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 A0A096LPE4 126 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 A0A1W2PPZ6 126 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 ATP6V1G2-DDX39BF2Z307 99 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 M0R3H8 397 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 AIM2O14862 343 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 WNT11O96014 354 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 OPN1SWP03999 348 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 CDH12P55289 794 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 TUBA1BP68363 451 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 TUBA4AP68366 448 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 KRTAP1-1Q07627 177 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 DUSP7Q16829 419 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 C5orf46Q6UWT4 87 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 TUBA1AQ71U36 451 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 H1FNTQ75WM6 255 aaPredicted RBP16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 FBXL14Q8N1E6 418 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 REG4Q9BYZ8 158 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 NELFAQ9H3P2 528 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 MOKQ9UQ07 419 aa16.84■□□□□ 0.29
SMARCB1-204ENST00000407422 OR6C65A6NJZ3 312 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 INAFM1C9JVW0 142 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 M0QX08 132 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 SSX4O60224 188 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 HPRP00739 348 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 ROR2Q01974 943 aaKnown RBP16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 C1DQ13901 141 aaKnown RBP16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 NFYCQ13952 458 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 HMBOX1Q6NT76 420 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 BHLHE22Q8NFJ8 381 aaPredicted RBP16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 GPR32P1Q8NGA4 272 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 LINC00470Q9BZP3 86 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 KAT8Q9H7Z6 458 aaKnown RBP16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 FKRPQ9H9S5 495 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 SELENONQ9NZV5 590 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 RCE1Q9Y256 329 aa16.83■□□□□ 0.28
SMARCB1-204ENST00000407422 IGHV1-18A0A0C4DH31 117 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 LRRN3E7EW58 273 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 MS4A18H0YCH9 400 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 HLA-DOBP13765 273 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 IL1RL1Q01638 556 aa16.82■□□□□ 0.28
SMARCB1-204ENST00000407422 RBBP4Q09028 425 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms