RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 OR4C16Q8NGL9 310 aa6.84□□□□□ -1.32
HDAC9-202ENST00000405010 PFN4Q8NHR9 129 aa6.84□□□□□ -1.32
HDAC9-202ENST00000405010 PHOSPHO1Q8TCT1 267 aa6.84□□□□□ -1.32
HDAC9-202ENST00000405010 HERVK_113Q902F9 699 aa6.84□□□□□ -1.32
HDAC9-202ENST00000405010 SENP5Q96HI0 755 aaPredicted RBP6.84□□□□□ -1.32
HDAC9-202ENST00000405010 KCNJ15Q99712 375 aa6.84□□□□□ -1.32
HDAC9-202ENST00000405010 POFUT1Q9H488 388 aa6.84□□□□□ -1.32
HDAC9-202ENST00000405010 NCDNQ9UBB6 729 aa6.84□□□□□ -1.32
HDAC9-202ENST00000405010 ALPK2Q86TB3 2170 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ASCC3Q8N3C0 2202 aaKnown RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 RPS10-NUDT3A0A1W2PQS6 291 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 C11orf98E9PRG8 122 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TRIM77I1YAP6 450 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 FCMRO60667 390 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 AK1P00568 194 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ZNF20P17024 532 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CPT2P23786 658 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 RPS10P46783 165 aaKnown RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 MEF2DQ14814 521 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 GPNMBQ14956 572 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 GFOD2Q3B7J2 385 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ABHD13Q7L211 337 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 NAA40Q86UY6 237 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ACBD4Q8NC06 268 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 IGSF21Q96ID5 467 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ZNF587Q96SQ5 575 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CDC6Q99741 560 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 EPHA6Q9UF33 1036 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 PCDHB10Q9UN67 800 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 C14orf166Q9Y224 244 aaKnown RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 PCDHGA9Q9Y5G4 932 aaKnown RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 PRAMEF25A6NGN4 478 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 HMSDA8MTL9 139 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CLDN4O14493 209 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SLC31A1O15431 190 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 PLPP2O43688 288 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 KAT7O95251 611 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CLUP10909 449 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CXCL2P19875 107 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 NME2P22392 152 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ENPP1P22413 925 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CXCR1P25024 350 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CSF2RBP32927 897 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 EIF2S3LQ2VIR3 472 aaKnown RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SLC25A30Q5SVS4 291 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SLC16A13Q7RTY0 426 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ASPGQ86U10 573 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ZNF565Q8N9K5 539 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CDRT4Q8N9R6 151 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 OR4K17Q8NGC6 315 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 WFIKKN2Q8TEU8 576 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 FAM46BQ96A09 425 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SLC22A18Q96BI1 424 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 DTD2Q96FN9 168 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SCLYQ96I15 445 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 KLHL15Q96M94 604 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 OR1F2PQ96R84 312 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 UBL7Q96S82 380 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 NMNAT3Q96T66 252 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 PBDC1Q9BVG4 233 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ZMAT3Q9HA38 289 aaKnown RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 PRSS16Q9NQE7 514 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 HS3ST2Q9Y278 367 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ATG4BQ9Y4P1 393 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TBC1D3DA0A087WVF3 549 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TBC1D3IA0A087WXS9 549 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 MEGF11A6BM72 1044 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 FAM74A7A6NL05 159 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TBC1D3LB9A6J9 549 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 LATO43561 262 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 INHAP05111 366 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TBC1D3HP0C7X1 549 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 CALCBP10092 127 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ZNF28P17035 718 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 PPM1AP35813 382 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 POU3F4P49335 361 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 RAB5CP51148 216 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 FKBP1BP68106 108 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 RIN1Q13671 783 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 FAM74A3Q4VXF1 159 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ELFN2Q5R3F8 820 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 DCST2Q5T1A1 773 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ZNF626Q68DY1 528 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TBC1D3CQ6IPX1 549 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 LPCAT3Q6P1A2 487 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TMEM71Q6P5X7 295 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 RSPO2Q6UXX9 243 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TMEM64Q6YI46 380 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 DPPA4Q7L190 304 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SLC29A4Q7RTT9 530 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TSEN54Q7Z6J9 526 aaKnown RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 TBC1D3Q8IZP1 549 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ZNF511Q8NB15 262 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 ZNF649Q9BS31 505 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SGPP1Q9BX95 441 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 BCL2L14Q9BZR8 327 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SLC19A3Q9BZV2 496 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SPHK2Q9NRA0 654 aa6.83□□□□□ -1.32
HDAC9-202ENST00000405010 SF3B6Q9Y3B4 125 aaKnown RBP6.83□□□□□ -1.32
HDAC9-202ENST00000405010 MFSD2BA6NFX1 497 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms