RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 H1FNTQ75WM6 255 aaPredicted RBP11.67□□□□□ -0.54
SDF4-203ENST00000403997 NET1Q7Z628 596 aaPredicted RBP11.67□□□□□ -0.54
SDF4-203ENST00000403997 RANBP3LQ86VV4 465 aaPredicted RBP11.67□□□□□ -0.54
SDF4-203ENST00000403997 OR10A6Q8NH74 314 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 COX4I2Q96KJ9 171 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 WFDC6Q9BQY6 131 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 HEATR1Q9H583 2144 aaKnown RBP11.67□□□□□ -0.54
SDF4-203ENST00000403997 KAT8Q9H7Z6 458 aaKnown RBP11.67□□□□□ -0.54
SDF4-203ENST00000403997 FGFR1OP2Q9NVK5 253 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 FAIMQ9NVQ4 179 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 SEC14L4Q9UDX3 406 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 IGKV1D-42A0A075B6H8 117 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 A0A087WUJ7 227 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 M0R082 166 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 M0R3H8 397 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 FBP2O00757 339 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 TPST2O60704 377 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 UPK3AO75631 287 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 LY6G6DO95868 133 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 LGI1O95970 557 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 WNT11O96014 354 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 CD8AP01732 235 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 OPN1SWP03999 348 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 PTNP21246 168 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 GRPRP30550 384 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 LTBQ06643 244 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 SPOCK1Q08629 439 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 CYLC2Q14093 348 aaPredicted RBP11.66□□□□□ -0.54
SDF4-203ENST00000403997 MFSD13AQ14CX5 517 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 DUSP7Q16829 419 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 MMEL1Q495T6 779 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 HIKESHIQ53FT3 197 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 C1QTNF12Q5T7M4 302 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 AGAP6Q5VW22 663 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 HMBOX1Q6NT76 420 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 SLC30A8Q8IWU4 369 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 C10orf53Q8N6V4 93 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 ZNF417Q8TAU3 575 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 SLC26A7Q8TE54 656 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 ZNF587Q96SQ5 575 aaPredicted RBP11.66□□□□□ -0.54
SDF4-203ENST00000403997 EPYCQ99645 322 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 MCHR1Q99705 422 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 TRAF4Q9BUZ4 470 aaPredicted RBP11.66□□□□□ -0.54
SDF4-203ENST00000403997 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 KLHL14Q9P2G3 628 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 B3GALT5Q9Y2C3 310 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 ATP23Q9Y6H3 246 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 ALPK2Q86TB3 2170 aa11.66□□□□□ -0.54
SDF4-203ENST00000403997 A0A0B4J2E0 115 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 A0A1B0GX12 115 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 E7EQL1 145 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 C8BP07358 591 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 NQO1P15559 274 aaKnown RBP11.65□□□□□ -0.54
SDF4-203ENST00000403997 FABP6P51161 128 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 CDH12P55289 794 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 SLC25A3Q00325 362 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 ROR2Q01974 943 aaKnown RBP11.65□□□□□ -0.54
SDF4-203ENST00000403997 KLF10Q13118 480 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 CLEC12BQ2HXU8 276 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 INTS11Q5TA45 600 aaKnown RBP11.65□□□□□ -0.54
SDF4-203ENST00000403997 NANOGP8Q6NSW7 305 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 LINGO2Q7L985 606 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 PATL1Q86TB9 770 aaKnown RBP11.65□□□□□ -0.54
SDF4-203ENST00000403997 DTX2Q86UW9 622 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 GPR32P1Q8NGA4 272 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 OR1K1Q8NGR3 316 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 ALKBH3Q96Q83 286 aaPredicted RBP11.65□□□□□ -0.54
SDF4-203ENST00000403997 DHRS9Q9BPW9 319 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 ASPNQ9BXN1 380 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 LINC00470Q9BZP3 86 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 NANOGQ9H9S0 305 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 FKRPQ9H9S5 495 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 MRGBPQ9NV56 204 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 B3GAT1Q9P2W7 334 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 RCE1Q9Y256 329 aa11.65□□□□□ -0.54
SDF4-203ENST00000403997 PLCE1Q9P212 2302 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 LOC102725191A0A1B0GVB3 256 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 CPSF4LA6NMK7 179 aaKnown RBP11.64□□□□□ -0.55
SDF4-203ENST00000403997 FMO6PO60774 539 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 FZD7O75084 574 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 SLC43A1O75387 559 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 HOXB4P17483 251 aaPredicted RBP11.64□□□□□ -0.55
SDF4-203ENST00000403997 TTKP33981 857 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 PCGF2P35227 344 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 UBE2NP61088 152 aaKnown RBP11.64□□□□□ -0.55
SDF4-203ENST00000403997 PMS2P3Q13401 168 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 TNK1Q13470 666 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 VEZF1Q14119 521 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 ETFDHQ16134 617 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 NRF1Q16656 503 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 VMACQ2NL98 169 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 TRMT5Q32P41 509 aaKnown RBP11.64□□□□□ -0.55
SDF4-203ENST00000403997 TBRG1Q3YBR2 411 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 SWT1Q5T5J6 900 aaKnown RBP11.64□□□□□ -0.55
SDF4-203ENST00000403997 ZNF613Q6PF04 617 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 GPR137CQ8N3F9 429 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 OR6T1Q8NGN1 323 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 OR6S1Q8NH40 331 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 VANGL1Q8TAA9 524 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms