RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 D6RAR5 112 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 GPR75O95800 540 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 AOAHP28039 575 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 HOXA9P31269 272 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 SLC35A2P78381 396 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 YIF1BQ5BJH7 314 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 PAPD4Q6PIY7 484 aaKnown RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 OPN5Q6U736 354 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 WFDC8Q8IUA0 241 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ZFP82Q8N141 532 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 HYLS1Q96M11 299 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 WSB2Q9NYS7 404 aaPredicted RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 PTTG3PQ9NZH4 202 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 NXT1Q9UKK6 140 aaKnown RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 MCRIP1C9JLW8 97 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 BLVRBP30043 206 aaPredicted RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 GLYR1Q49A26 553 aaPredicted RBP12.76□□□□□ -0.37
VAPA-202ENST00000400000 BPIFCQ8NFQ6 507 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 OR1N1Q8NGS0 311 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 HPSE2Q8WWQ2 592 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 ARL11Q969Q4 196 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 OR2B2Q9GZK3 357 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 KCNJ16Q9NPI9 418 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 BIN3Q9NQY0 253 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 HHLA2Q9UM44 414 aa12.76□□□□□ -0.37
VAPA-202ENST00000400000 E9PI62 339 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 GABRPO00591 440 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 TM4SF4P48230 202 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 PLAC9Q5JTB6 97 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 C15orf39Q6ZRI6 1047 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 NCCRP1Q6ZVX7 275 aaPredicted RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 TDHQ8IZJ6 230 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 PLPP7Q8NBV4 271 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 OR4M1Q8NGD0 313 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 OR10K1Q8NGX5 313 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 TRMT61AQ96FX7 289 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.376e-7■■□□□ 13.2
VAPA-202ENST00000400000 MBNL1Q9NR56 388 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 DCAF13Q9NV06 445 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 SDHAF2Q9NX18 166 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 RGPD5Q99666 1765 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 MEX3AA1L020 520 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 OR2T1O43869 369 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 TXNDC12O95881 172 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 HTR3AP46098 478 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 MZT1Q08AG7 82 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 NXPE3Q969Y0 559 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 KCNJ15Q99712 375 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 HES7Q9BYE0 225 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 LINC01553A4QN01 128 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 TK1P04183 234 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 PKLRP30613 574 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 PGGHGQ32M88 737 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 NHSL2Q5HYW2 709 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 BANF2Q9H503 90 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 FGF21Q9NSA1 209 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 MYH9P35579 1960 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 NME2P22392 152 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 SUOXP51687 545 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 HNRNPFP52597 415 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 TNFRSF17Q02223 184 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 CPZQ66K79 652 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 SPNS2Q8IVW8 549 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 ZNF439Q8NDP4 499 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 EMG1Q92979 244 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 ZNF286AQ9HBT8 521 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 PIGLQ9Y2B2 252 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 WIF1Q9Y5W5 379 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 SOCS7O14512 581 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 SCGB1D1O95968 90 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 PTHP01270 115 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 FAM157BP0CG42 384 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 RPS25P62851 125 aaKnown RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 TMEM244Q5VVB8 128 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 OR8G2PQ6IF36 304 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 PGBD5Q8N414 524 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 SORT1Q99523 831 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 TCEAL2Q9H3H9 227 aaPredicted RBP12.75□□□□□ -0.37
VAPA-202ENST00000400000 C1orf198Q9H425 327 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 NGBQ9NPG2 151 aa12.75□□□□□ -0.37
VAPA-202ENST00000400000 DPM1O60762 260 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 OR6V1Q8N148 313 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 MFSD9Q8NBP5 474 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 OR2T11Q8NH01 316 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 TMEM163Q8TC26 289 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 OR51J1Q9H342 316 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 LOC285095A0A1B0GVY8 99 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 CHRNB1P11230 501 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 PCBD1P61457 104 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 RNF128Q8TEB7 428 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 SPIN2AQ99865 258 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 SPIN2BQ9BPZ2 258 aa12.74□□□□□ -0.37
VAPA-202ENST00000400000 ATG4BQ9Y4P1 393 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms