RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 OR52N1Q8NH53 320 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR6X1Q8NH79 312 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SAP25Q8TEE9 199 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SMPDL3AQ92484 453 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SLC38A4Q969I6 547 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF689Q96CS4 500 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 LSM7Q9UK45 103 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 PCYT1BQ9Y5K3 369 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 NOX1Q9Y5S8 564 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 CCDC88CQ9P219 2028 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 ALPK2Q86TB3 2170 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SMIM31A0A1B0GVY4 71 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 C1orf226A1L170 272 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SGK494L7N484 410 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 UPK1AO00322 258 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 PFDN6O15212 129 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 FLRT2O43155 660 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 TSPAN2O60636 221 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 F10P00742 488 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 TFP02787 698 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 CTSLP07711 333 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 HSD17B1P14061 328 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 HK1P19367 917 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 S100A3P33764 101 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 GPR12P47775 334 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF134P52741 427 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 ADARB1P78563 741 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 EMX2Q04743 252 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SERTAD2Q14140 314 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SLC17A1Q14916 467 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 ITPRIPL2Q3MIP1 535 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 AASDHQ4L235 1098 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 CARD16Q5EG05 197 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SLC22A10Q63ZE4 541 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMEM107Q6UX40 140 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 PLXDC2Q6UX71 529 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMPRSS11BQ86T26 416 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 TRAPPC5Q8IUR0 188 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 GABRG1Q8N1C3 465 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 M1APQ8TC57 530 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMEM171Q8WVE6 324 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 C20orf24Q9BUV8 137 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR51B5Q9H339 312 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 MYNNQ9NPC7 610 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 COL6A3P12111 3177 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 GNG14A0A1W2PPG7 69 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 OTOL1A6NHN0 477 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 PCP4L1A6NKN8 68 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 BBIP1A8MTZ0 92 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 G3V2T6 193 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 RFXANKO14593 260 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 RAD51DO75771 328 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 CLDN9O95484 217 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 TGFB1P01137 390 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 SERPIND1P05546 499 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 UQCRC1P31930 480 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 OTX1P32242 354 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 P2RY4P51582 365 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 RPS14P62263 151 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 CD300CQ08708 224 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 PJVKQ0ZLH3 352 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 NR1D2Q14995 579 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 MRPL23Q16540 153 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 GXYLT1Q4G148 440 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 SYTL3Q4VX76 610 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 LAIR1Q6GTX8 287 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 NRARPQ7Z6K4 114 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZDHHC13Q8IUH4 622 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 SYT12Q8IV01 421 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 ENTHD1Q8IYW4 607 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 C1orf52Q8N6N3 182 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR6Q1Q8NGQ2 317 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 SPPL2AQ8TCT8 520 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 SMPDL3BQ92485 455 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 VOPP1Q96AW1 172 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 SPNS1Q9H2V7 528 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 RERGLQ9H628 205 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 NARFLQ9H6Q4 476 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 CTPS2Q9NRF8 586 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 PITPNC1Q9UKF7 332 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 KIAA1671Q9BY89 1806 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 DMDP11532 3685 aa5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 URB1O60287 2271 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-202ENST00000399438 PRAMEF33A0A0G2JMD5 474 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 ARHGEF33A8MVX0 844 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 SIVA1O15304 175 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 RGS14O43566 566 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 GMDSO60547 372 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 HIST1H2AGP0C0S8 130 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 GSTT2P0CG29 244 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 GSTT2BP0CG30 244 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 HIST1H2ADP20671 130 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 RIDAP52758 137 aaKnown RBP5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 CD47Q08722 323 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 BNIP2Q12982 314 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 CDKN3Q16667 212 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 ZNF605Q86T29 641 aa5.65□□□□□ -1.51
TRAPPC13-202ENST00000399438 RNF130Q86XS8 419 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms