RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 KLHL24Q6TFL4 600 aa8.62□□□□□ -1.03
COL28A1-201ENST00000399429 SLCO4C1Q6ZQN7 724 aa8.62□□□□□ -1.03
COL28A1-201ENST00000399429 EID2Q8N6I1 236 aa8.62□□□□□ -1.03
COL28A1-201ENST00000399429 FBXO22Q8NEZ5 403 aa8.62□□□□□ -1.03
COL28A1-201ENST00000399429 CNTNAP3Q9BZ76 1288 aa8.62□□□□□ -1.03
COL28A1-201ENST00000399429 HEXA-AS1Q9H8Q6 139 aa8.62□□□□□ -1.03
COL28A1-201ENST00000399429 DHDHQ9UQ10 334 aa8.62□□□□□ -1.03
COL28A1-201ENST00000399429 ALPK2Q86TB3 2170 aa8.62□□□□□ -1.03
COL28A1-201ENST00000399429 FOCADQ5VW36 1801 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3DA0A087WVF3 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3IA0A087WXS9 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3EA0A087X179 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3KA0A087X1G2 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 hCG_1809904A0A1W2PP81 198 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 A0A1W2PR64 198 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 A0A1W2PRV1 198 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 PLSCR5A0PG75 271 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3BA6NDS4 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3FA6NER0 549 aaPredicted RBP8.61□□□□□ -1.03
COL28A1-201ENST00000399429 A8MXK9 166 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3LB9A6J9 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 RENP00797 406 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 ADRA2AP08913 450 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3HP0C7X1 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 AKR1A1P14550 325 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 C4orf17Q53FE4 359 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3GQ6DHY5 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3CQ6IPX1 549 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 LEG1Q6P5S2 330 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 LCTLQ6UWM7 567 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 P4HA3Q7Z4N8 544 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TBC1D3Q8IZP1 549 aaPredicted RBP8.61□□□□□ -1.03
COL28A1-201ENST00000399429 OR9A2Q8NGT5 310 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 GLYATL1Q969I3 302 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SLC25A44Q96H78 314 aaPredicted RBP8.61□□□□□ -1.03
COL28A1-201ENST00000399429 RHOVQ96L33 236 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 MAP3K3Q99759 626 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 MRI1Q9BV20 369 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 OR51M1Q9H341 326 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 DPEP2Q9H4A9 486 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 ITGB4P16144 1822 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 A0A1B0GV90 55 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 WASH3PC4AMC7 463 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 MAKP20794 623 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 GUCA2AQ02747 115 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 IRF5Q13568 498 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 PABPC1L2AQ5JQF8 200 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 OR6K3Q8NGY3 331 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 OR10G6Q8NH81 332 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 CXorf40AQ8TE69 158 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 A4GNTQ9UNA3 340 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 WIF1Q9Y5W5 379 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TRPM3Q9HCF6 1732 aaPredicted RBP8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SRPX2O60687 465 aaPredicted RBP8.61□□□□□ -1.03
COL28A1-201ENST00000399429 OR2C1O95371 312 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 IL5P05113 134 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 PRKAR1BP31321 381 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SERPINF1P36955 418 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SLC6A12P48065 614 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 IDH3GP51553 393 aaPredicted RBP8.61□□□□□ -1.03
COL28A1-201ENST00000399429 CDK5Q00535 292 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 ALG10BQ5I7T1 473 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 TANGO2Q6ICL3 276 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 C22orf39Q6P5X5 142 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SLC24A5Q71RS6 500 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 ZNF417Q8TAU3 575 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 GPR148Q8TDV2 347 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 POM121Q96HA1 1249 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SLC6A18Q96N87 628 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SCGB3A2Q96PL1 93 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 PRRT1Q99946 306 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 FAM83CQ9BQN1 747 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 MCOLN1Q9GZU1 580 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 OR52A5Q9H2C5 316 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 UQCC1Q9NVA1 299 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 SLCO1C1Q9NYB5 712 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 CLEC4EQ9ULY5 219 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 FBXO7Q9Y3I1 522 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 KPTNQ9Y664 436 aa8.61□□□□□ -1.03
COL28A1-201ENST00000399429 IGLV3-10A0A075B6K4 115 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 FITM1A5D6W6 292 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 TMEM235A6NFC5 223 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 ZNF705FA8MVS1 300 aaPredicted RBP8.6□□□□□ -1.03
COL28A1-201ENST00000399429 RNASEK-C17orf49H0YIS7 233 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 ABCD4O14678 606 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 GPRIN2O60269 458 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 AGR2O95994 175 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 ERCC1P07992 297 aaPredicted RBP8.6□□□□□ -1.03
COL28A1-201ENST00000399429 ZNF705DP0CH99 300 aaPredicted RBP8.6□□□□□ -1.03
COL28A1-201ENST00000399429 ZNF705BP0CI00 300 aaPredicted RBP8.6□□□□□ -1.03
COL28A1-201ENST00000399429 NPBWR1P48145 328 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 GPR143P51810 404 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 UBE2KP61086 200 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 SERTAD2Q14140 314 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 ZNF750Q32MQ0 723 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 NIPAL3Q6P499 406 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 ZNF620Q6ZNG0 422 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 MBOAT2Q6ZWT7 520 aa8.6□□□□□ -1.03
COL28A1-201ENST00000399429 GDF7Q7Z4P5 450 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms