RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 IL1RL1Q01638 556 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MS4A18Q3C1V0 323 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 H1FNTQ75WM6 255 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 NKAIN4Q8IVV8 208 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FITM2Q8N6M3 262 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ANKS4BQ8N8V4 417 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FAM156AQ8NDB6 213 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SLC41A3Q96GZ6 507 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ADA2Q9NZK5 511 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 EGFL7Q9UHF1 273 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TAGLN3Q9UI15 199 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ST6GALNAC2Q9UJ37 374 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 B3GALT5Q9Y2C3 310 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PLEKHA6Q9Y2H5 1048 aa12.42□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CIB4A0PJX0 185 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PDLIM1O00151 329 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ZNF682O95780 498 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FAM107AO95990 144 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SERPINA1P01009 418 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 HLA-DOBP13765 273 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ZNF43P17038 809 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 GGT1P19440 569 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 FUT4P22083 530 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 YAP1P46937 504 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 IST1P53990 364 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CLDN17P56750 224 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TAS2R41P59536 307 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SLC25A3Q00325 362 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 NIPAL3Q6P499 406 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TTC33Q6PID6 262 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SEZ6L2Q6UXD5 910 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 HSD17B8Q92506 261 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PLPPR2Q96GM1 343 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 OXGR1Q96P68 337 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ZNF426Q9BUY5 554 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 SLCO5A1Q9H2Y9 848 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MEPEQ9NQ76 525 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CCM2LQ9NUG4 571 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TAS2R16Q9NYV7 291 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 RIMS3Q9UJD0 308 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ADAM21Q9UKJ8 722 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ROS1P08922 2347 aa12.41□□□□□ -0.42
HLA-DQB1-202ENST00000399079 A0A1W2PR80 420 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 NDUFAB1O14561 156 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CH25HO95992 272 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PLAUP00749 431 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CDH2P19022 906 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TCN1P20061 433 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 C1DQ13901 141 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MFSD13AQ14CX5 517 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 BEX5Q5H9J7 111 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 GKAP1Q5VSY0 366 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CBLL1Q75N03 491 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LRRC17Q8N6Y2 441 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 RBM15BQ8NDT2 890 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 OR6S1Q8NH40 331 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 LZICQ8WZA0 190 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MPP4Q96JB8 637 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 ASPNQ9BXN1 380 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MRPL39Q9NYK5 338 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 CORINQ9Y5Q5 1042 aa12.4□□□□□ -0.42
HLA-DQB1-202ENST00000399079 MAP1AP78559 2803 aaPredicted RBP12.4□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR5H1A6NKK0 313 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 J3KTA2 159 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TRAF3IP2O43734 574 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 UPK3AO75631 287 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SERPINI2O75830 405 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR5F1O95221 314 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MSX2P35548 267 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PPA1Q15181 289 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 GABRA6Q16445 453 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF74Q16587 644 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 LINGO2Q7L985 606 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SCAIQ8N9R8 606 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 POMGNT2Q8NAT1 580 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ADPRHL1Q8NDY3 354 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR52N5Q8NH56 324 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PFN4Q8NHR9 129 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 FAM162AQ96A26 154 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 HSH2DQ96JZ2 352 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ALKBH3Q96Q83 286 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NPAP1Q9NZP6 1156 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RHCGQ9UBD6 479 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 A4GNTQ9UNA3 340 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ALPK2Q86TB3 2170 aa12.39□□□□□ -0.43
HLA-DQB1-202ENST00000399079 LOC102725191A0A1B0GVB3 256 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 C11orf98E9PRG8 122 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PLPP3O14495 311 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 KRT33AO76009 404 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF432O94892 652 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MT-ATP6P00846 226 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ADORA3P0DMS8 318 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 AHCYP23526 432 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 UGT2B15P54855 530 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 POU3F1Q03052 451 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms