RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ITGB2P05107 769 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 SLC35E2P0CK97 266 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 OPRD1P41143 372 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 FAM83HQ6ZRV2 1179 aaPredicted RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 OR6V1Q8N148 313 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 CXorf36Q9H7Y0 433 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 P2RY10O00398 339 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 ZNF14P17017 642 aaPredicted RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 ENDOVQ8N8Q3 282 aaKnown RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 POC1BQ8TC44 478 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 RASD2Q96D21 266 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 MCRIP1C9JLW8 97 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 TK1P04183 234 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 BDKRB2P30411 391 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 EIF2DP41214 584 aaKnown RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 PGFP49763 221 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 Q6ZPB1 254 aaPredicted RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 RPS19BP1Q86WX3 136 aaKnown RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 PFN4Q8NHR9 129 aa10.5□□□□□ -0.73
TTC28-201ENST00000397906 PDLIM5Q96HC4 596 aaKnown RBP10.5□□□□□ -0.73
TTC28-201ENST00000397906 FURINP09958 794 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 HLCSP50747 726 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 SNRPD2P62316 118 aaKnown RBP10.49□□□□□ -0.73
TTC28-201ENST00000397906 KEAP1Q14145 624 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 PRTGQ2VWP7 1150 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 DEFB124Q8NES8 71 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 OR6F1Q8NGZ6 308 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 BOD1Q96IK1 185 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 MENTQ9BUN1 341 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 MMP28Q9H239 520 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 TBCCD1Q9NVR7 557 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 EDARQ9UNE0 448 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 ALG12Q9BV10 488 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 ASF1BQ9NVP2 202 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 CTNSO60931 367 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 FNDC9Q8TBE3 224 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 EVPLQ92817 2033 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 OCSTAMPQ9BR26 566 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 SGPP1Q9BX95 441 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 A0A096LPE4 126 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 A0A1W2PPZ6 126 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 IL2RAP01589 272 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 TFP02787 698 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 CLDN12P56749 244 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 ARL6IP1Q15041 203 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 ZNF468Q5VIY5 522 aaPredicted RBP10.49□□□□□ -0.73
TTC28-201ENST00000397906 METRNLQ641Q3 311 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 ELP2Q6IA86 826 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 TRUB1Q8WWH5 349 aaKnown RBP10.49□□□□□ -0.73
TTC28-201ENST00000397906 ARSGQ96EG1 525 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 EMC6Q9BV81 110 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 PIGLQ9Y2B2 252 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 SNX11Q9Y5W9 270 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 MYO18AQ92614 2054 aaKnown RBP10.49□□□□□ -0.73
TTC28-201ENST00000397906 C4orf47A7E2U8 309 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 H0YIV9 168 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 KRBOX4Q5JUW0 171 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 ZNF679Q8IYX0 411 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 OR5M9Q8NGP3 310 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 SELENOIQ9C0D9 397 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 LTB4R2Q9NPC1 389 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 ACOD1A6NK06 481 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 F5H5P2 479 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 CSO75390 466 aaKnown RBP10.49□□□□□ -0.73
TTC28-201ENST00000397906 IL13RA1P78552 427 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 SLC48A1Q6P1K1 146 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 UTP4Q969X6 686 aaKnown RBP10.49□□□□□ -0.73
TTC28-201ENST00000397906 IL37Q9NZH6 218 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 NHSQ6T4R5 1651 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 SLCO2B1O94956 709 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 CSF1P09603 554 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 F2RL1P55085 397 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 DYRK1AQ13627 763 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 PCDHGA5Q9Y5G8 931 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 ARPC5O15511 151 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 PFN3P60673 137 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 TFAP2CQ92754 450 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 AP1S3Q96PC3 154 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 BTBD17A6NE02 478 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 FANCGO15287 622 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 RAB4AP20338 218 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 TNK1Q13470 666 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 SECTM1Q8WVN6 248 aa10.49□□□□□ -0.73
TTC28-201ENST00000397906 CNIH1O95406 144 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 CLDN6P56747 220 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 GFRALQ6UXV0 394 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 CACNG2Q9Y698 323 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 LYRM1O43325 122 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 CLEC3BP05452 202 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 NPPBP16860 134 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 HTR2AP28223 471 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 GFERP55789 205 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 TMEM185AQ8NFB2 350 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 CNOT9Q92600 299 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 KHSRPQ92945 711 aaKnown RBP eCLIP10.48□□□□□ -0.732e-6■■■■□ 20.8
TTC28-201ENST00000397906 HRASLS5Q96KN8 279 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 P2RY12Q9H244 342 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 ZNF286AQ9HBT8 521 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 PRDM4Q9UKN5 801 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 EIF1BO60739 113 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms