RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 HDDC3Q8N4P3 179 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 ZCCHC10Q8TBK6 192 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 ASB16Q96NS5 453 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 SDF2Q99470 211 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 CMSS1Q9BQ75 279 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 TEX101Q9BY14 249 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 HDAC8Q9BY41 377 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 FXYD6Q9H0Q3 95 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 AUNIPQ9H7T9 357 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 TAS2R5Q9NYW4 299 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 USP36Q9P275 1121 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 FBXL3Q9UKT7 428 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 PRICKLE3O43900 615 aaPredicted RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 DNAJB6O75190 326 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 NDUFS6O75380 124 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 SPDEFO95238 335 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 PPP1R3DO95685 299 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 DRD3P35462 400 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 GPR143P51810 404 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 NR0B1P51843 470 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 TNFRSF17Q02223 184 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 ARHGAP11BQ3KRB8 267 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 TMEM255AQ5JRV8 349 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 AVPI1Q5T686 147 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 DHRS7BQ6IAN0 325 aaPredicted RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 UQCC3Q6UW78 93 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 MAMSTRQ6ZN01 415 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 MFSD9Q8NBP5 474 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 RELL2Q8NC24 303 aaPredicted RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 GRHL3Q8TE85 626 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 BPIFA2Q96DR5 249 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 WDR89Q96FK6 387 aaPredicted RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 ADAP2Q9NPF8 381 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 AKAP7Q9P0M2 348 aaPredicted RBP14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 SERGEFQ9UGK8 458 aa14.68□□□□□ -0.06
CHMP1A-201ENST00000397901 ATG2AQ2TAZ0 1938 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 TBC1D3KA0A087X1G2 549 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 TBC1D3FA6NER0 549 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 RIIAD1A6NNX1 92 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 RCBTB2O95199 551 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 IL5P05113 134 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 TRAM1Q15629 374 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 TRMT12Q53H54 448 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 EIPR1Q53HC9 387 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 TBC1D3GQ6DHY5 549 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 NHLRC1Q6VVB1 395 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 SLC16A13Q7RTY0 426 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 PUSL1Q8N0Z8 303 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 RAB7BQ96AH8 199 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 MRPL48Q96GC5 212 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 OR51M1Q9H341 326 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 CCDC86Q9H6F5 360 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 INPP5EQ9NRR6 644 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 RASL12Q9NYN1 266 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 GPR31O00270 319 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 IGF2P01344 180 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 LAMP2P13473 410 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 S100PP25815 95 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 NDUFS1P28331 727 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 CMPK1P30085 196 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 NRG3P56975 720 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 TAS2R43P59537 309 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 GMFBP60983 142 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 DUSP8Q13202 625 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 DMKNQ6E0U4 476 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 SPAG16Q8N0X2 631 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 SHISA5Q8N114 240 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 ELP5Q8TE02 316 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 GCDHQ92947 438 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 RAB11FIP5Q9BXF6 653 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 BARX1Q9HBU1 254 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 NOX3Q9HBY0 568 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 MBD2Q9UBB5 411 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 RCE1Q9Y256 329 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 SIGLEC7Q9Y286 467 aa14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 AK6Q9Y3D8 172 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-201ENST00000397901 LYPD3O95274 346 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 UBBP0CG47 229 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 UBCP0CG48 685 aaKnown RBP14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 CD53P19397 219 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 DLX5P56178 289 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 RPS27AP62979 156 aaKnown RBP14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 UBA52P62987 128 aaKnown RBP14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 STX4Q12846 297 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 MELKQ14680 651 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 FIGNL1Q6PIW4 674 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 VN1R4Q7Z5H5 301 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 CDK20Q8IZL9 346 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 OR4E2Q8NGC2 313 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 OR51L1Q8NGJ5 315 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 OR4C6Q8NH72 309 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 C2CD4CQ8TF44 421 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 SMARCD2Q92925 531 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 SGK3Q96BR1 496 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 CRB3Q9BUF7 120 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 NIT2Q9NQR4 276 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 SLC22A11Q9NSA0 550 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 TMEM74BQ9NUR3 256 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 OPN4Q9UHM6 478 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 KCNE5Q9UJ90 142 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms