RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SLC16A1P53985 500 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 H3F3AP84243 136 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 POU4F3Q15319 338 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 Q6ZT83 130 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 CBLL1Q75N03 491 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 ZNF100Q8IYN0 542 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 ZC3HAV1LQ96H79 300 aaKnown RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 ZNF300Q96RE9 604 aaPredicted RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 ACTR6Q9GZN1 396 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 PLEKHF2Q9H8W4 249 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 RPS6KB2Q9UBS0 482 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 SLC13A4Q9UKG4 626 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 NOSIPQ9Y314 301 aaKnown RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 ZC3H12DA2A288 527 aaKnown RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 DEFB108AA8MXU0 73 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 HPRP00739 348 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 SERPINA1P01009 418 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 IFNA14P01570 189 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 IMPDH2P12268 514 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 FPR1P21462 350 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 IL32P24001 234 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 AQP1P29972 269 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 IST1P53990 364 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 ITGADQ13349 1161 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 TESK1Q15569 626 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 SFRP5Q5T4F7 317 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 PAQR6Q6TCH4 344 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 PAMR1Q6UXH9 720 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 PIWIL3Q7Z3Z3 882 aaKnown RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 CXorf67Q86X51 503 aaPredicted RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 STK35Q8TDR2 534 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 RASSF5Q8WWW0 418 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 KISS1RQ969F8 398 aaPredicted RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 C3orf49Q96BT1 292 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 ZNF775Q96BV0 537 aaPredicted RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 TAMM41Q96BW9 452 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 DNAJA3Q96EY1 480 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 CIB1Q99828 191 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 TAPBPLQ9BX59 468 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 RSPO3Q9BXY4 272 aaPredicted RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 LIME1Q9H400 295 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 C12orf10Q9HB07 376 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 IL1RAPQ9NPH3 570 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 AKAP9Q99996 3911 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 PRR14LQ5THK1 2151 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 LIPT2A6NK58 231 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 ZNF814B7Z6K7 855 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 M0QX08 132 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 ADAP00813 363 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 RAF1P04049 648 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 BEX5Q5H9J7 111 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 ATG4DQ86TL0 474 aaPredicted RBP12.9□□□□□ -0.34
SEC13-208ENST00000397109 ZDHHC13Q8IUH4 622 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 ARMC8Q8IUR7 673 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 CCDC103Q8IW40 242 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 GALNT4Q8N4A0 578 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 LSMEM1Q8N8F7 131 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 PIK3IP1Q96FE7 263 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 SLC29A1Q99808 456 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 FOXC2Q99958 501 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 TRIM2Q9C040 744 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 PARPBPQ9NWS1 579 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 ADPRHL2Q9NX46 363 aa12.9□□□□□ -0.34
SEC13-208ENST00000397109 ROS1P08922 2347 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 HRNRQ86YZ3 2850 aaPredicted RBP12.89□□□□□ -0.35
SEC13-208ENST00000397109 TMEM229AB2RXF0 380 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 SIAH2O43255 324 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 FRS3O43559 492 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 MRPL33O75394 65 aaKnown RBP12.89□□□□□ -0.35
SEC13-208ENST00000397109 CST1P01037 141 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 THBDP07204 575 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 LYNP07948 512 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 CD247P20963 164 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 CHN2P52757 468 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 ART1P52961 327 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 NR1H2P55055 460 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 KEAP1Q14145 624 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 GK3PQ14409 553 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 OR7A5Q15622 319 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 OTUD3Q5T2D3 398 aaPredicted RBP12.89□□□□□ -0.35
SEC13-208ENST00000397109 C1orf140Q5VVS0 124 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 C5orf46Q6UWT4 87 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 C22orf34Q6ZV56 151 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 SSX8Q7RTT4 187 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 CBR4Q8N4T8 237 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 DNAJA4Q8WW22 397 aaPredicted RBP12.89□□□□□ -0.35
SEC13-208ENST00000397109 HSD17B8Q92506 261 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 APH1AQ96BI3 265 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 MBD6Q96DN6 1003 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 NRBF2Q96F24 287 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 SF3B5Q9BWJ5 86 aaKnown RBP12.89□□□□□ -0.35
SEC13-208ENST00000397109 NGBQ9NPG2 151 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 TESQ9UGI8 421 aaKnown RBP12.89□□□□□ -0.35
SEC13-208ENST00000397109 PRSS50Q9UI38 385 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 BAG5Q9UL15 447 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 OAZ3Q9UMX2 235 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 SLC9A8Q9Y2E8 581 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 PLEKHA6Q9Y2H5 1048 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms