RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CFAP73A6NFT4 308 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 PPIHO43447 177 aaKnown RBP12.85□□□□□ -0.35
SEC13-206ENST00000397102 FRS3O43559 492 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 GSNP06396 782 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 HKR1P10072 659 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 TCN1P20061 433 aaPredicted RBP12.85□□□□□ -0.35
SEC13-206ENST00000397102 CLDN8P56748 225 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 ZNF311Q5JNZ3 666 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 PRAMEF8Q5VWM4 474 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 PRAMEF7Q5VXH5 474 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 MDP1Q86V88 176 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 CCDC36Q8IYA8 594 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 BPIFB2Q8N4F0 458 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 NOA1Q8NC60 698 aaKnown RBP12.85□□□□□ -0.35
SEC13-206ENST00000397102 ZNF416Q9BWM5 594 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 TMPRSS13Q9BYE2 586 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 RCE1Q9Y256 329 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 A0A0G2JMP0 313 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 A0A0X1KG70 313 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 AGAP5A6NIR3 686 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 A8MVM7 634 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 COPEO14579 308 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 NPHS1O60500 1241 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 ZNF432O94892 652 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 CHRM4P08173 479 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 G6PDP11413 515 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 UQCRC2P22695 453 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 ALDH3B1P43353 468 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 GNA13Q14344 377 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 SAXO2Q658L1 398 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 ACSM5Q6NUN0 579 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 OR4M2Q8NGB6 313 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 NANPQ8TBE9 248 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 SLC38A1Q9H2H9 487 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 ZNF665Q9H7R5 613 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 NTN4Q9HB63 628 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 GPR35Q9HC97 309 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 DDX28Q9NUL7 540 aaKnown RBP12.84□□□□□ -0.35
SEC13-206ENST00000397102 PRDM4Q9UKN5 801 aa12.84□□□□□ -0.35
SEC13-206ENST00000397102 J3QLI3 93 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 SLC43A1O75387 559 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 RP2O75695 350 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 MPZL1O95297 269 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 RPS4Y1P22090 263 aaKnown RBP12.83□□□□□ -0.36
SEC13-206ENST00000397102 GLRXP35754 106 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 CAPZA2P47755 286 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 SEC24CP53992 1094 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 CLDN17P56750 224 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 BNIP2Q12982 314 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 MAD2L1Q13257 205 aaPredicted RBP12.83□□□□□ -0.36
SEC13-206ENST00000397102 WHAMMP3Q1A5X7 153 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 CEACAM16Q2WEN9 425 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 MIDNQ504T8 468 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 MRPL2Q5T653 305 aaKnown RBP12.83□□□□□ -0.36
SEC13-206ENST00000397102 C1orf140Q5VVS0 124 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 ZCCHC23Q6ZST2 131 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 ZNF440Q8IYI8 595 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 GPR137CQ8N3F9 429 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 OR8J2Q8NGG1 315 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 NEURL3Q96EH8 262 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 TRNT1Q96Q11 434 aaKnown RBP12.83□□□□□ -0.36
SEC13-206ENST00000397102 SYT3Q9BQG1 590 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 ZNF385DQ9H6B1 395 aa12.83□□□□□ -0.36
SEC13-206ENST00000397102 WNK2Q9Y3S1 2297 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 HMGN4O00479 90 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 PLPP2O43688 288 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 NCR1O76036 304 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 CPSF4O95639 269 aaKnown RBP12.82□□□□□ -0.36
SEC13-206ENST00000397102 TFPTP0C1Z6 253 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 ARAFP10398 606 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 ZNF35P13682 527 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 IL7RP16871 459 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 ZNF43P17038 809 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 ADRA2CP18825 462 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 RPS23P62266 143 aaKnown RBP12.82□□□□□ -0.36
SEC13-206ENST00000397102 MAD2L1BPQ15013 274 aaPredicted RBP12.82□□□□□ -0.36
SEC13-206ENST00000397102 SYPL1Q16563 259 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 LRRC74BQ6ZQY2 392 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 ANKRD46Q86W74 232 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 ANKFN1Q8N957 763 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 RAB39BQ96DA2 213 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 ZNF837Q96EG3 531 aaPredicted RBP12.82□□□□□ -0.36
SEC13-206ENST00000397102 ASIC5Q9NY37 505 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 B3GNT2Q9NY97 397 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 NOP53Q9NZM5 478 aaKnown RBP12.82□□□□□ -0.36
SEC13-206ENST00000397102 MARCOQ9UEW3 520 aaPredicted RBP12.82□□□□□ -0.36
SEC13-206ENST00000397102 PPIAL4AQ9Y536 164 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 CORINQ9Y5Q5 1042 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 NOX1Q9Y5S8 564 aa12.82□□□□□ -0.36
SEC13-206ENST00000397102 A0A096LPI6 279 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 PRSS51A0A1B0GVH4 220 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 ZNF99A8MXY4 864 aaPredicted RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 NPIPB7O75200 414 aa12.81□□□□□ -0.36
SEC13-206ENST00000397102 DEAF1O75398 565 aaPredicted RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 DBIP07108 87 aaKnown RBP12.81□□□□□ -0.36
SEC13-206ENST00000397102 PNMTP11086 282 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms