RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 NR1H2P55055 460 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 DSCR4P56555 118 aaPredicted RBP12.17□□□□□ -0.46
SEC13-205ENST00000397101 MERTKQ12866 999 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 TRAM2Q15035 370 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
SEC13-205ENST00000397101 ATP6AP1Q15904 470 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 ELOA3BQ3SY89 546 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 ALG10BQ5I7T1 473 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 ZNF613Q6PF04 617 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 ULK3Q6PHR2 472 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 P4HA3Q7Z4N8 544 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 BTLAQ7Z6A9 289 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 PQLC1Q8N2U9 271 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 FADS6Q8N9I5 356 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 PIK3C3Q8NEB9 887 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 ELOA3Q8NG57 546 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 DNAJA4Q8WW22 397 aaPredicted RBP12.17□□□□□ -0.46
SEC13-205ENST00000397101 MED17Q9NVC6 651 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 A4GNTQ9UNA3 340 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 SAMHD1Q9Y3Z3 626 aaKnown RBP12.17□□□□□ -0.46
SEC13-205ENST00000397101 U3KQV3 271 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 EXPH5Q8NEV8 1989 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 USF3Q68DE3 2245 aa12.17□□□□□ -0.46
SEC13-205ENST00000397101 A0A087WZY1 265 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 SLC22A20A6NK97 555 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 CD5LO43866 347 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 ADAM11O75078 769 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 ATP6V1G2O95670 118 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 ZNF23P17027 643 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 TACR3P29371 465 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 SLC1A3P43003 542 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 STARP49675 285 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 PPP1R8Q12972 351 aaKnown RBP12.16□□□□□ -0.46
SEC13-205ENST00000397101 RAET1LQ5VY80 246 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 TTC33Q6PID6 262 aaPredicted RBP12.16□□□□□ -0.46
SEC13-205ENST00000397101 PLXDC2Q6UX71 529 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 ZNF704Q6ZNC4 412 aaPredicted RBP12.16□□□□□ -0.46
SEC13-205ENST00000397101 TSEN54Q7Z6J9 526 aaKnown RBP12.16□□□□□ -0.46
SEC13-205ENST00000397101 OFCC1Q8IZS5 231 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 CNEP1R1Q8N9A8 125 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 ATP6V1C2Q8NEY4 427 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 ST8SIA1Q92185 356 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 SLC38A4Q969I6 547 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 C1GALT1C1Q96EU7 318 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 CENPNQ96H22 339 aaPredicted RBP12.16□□□□□ -0.46
SEC13-205ENST00000397101 SFXN2Q96NB2 322 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 NMNAT1Q9HAN9 279 aaPredicted RBP12.16□□□□□ -0.46
SEC13-205ENST00000397101 RNPEPL1Q9HAU8 725 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 SERINC1Q9NRX5 453 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 ACER3Q9NUN7 267 aa12.16□□□□□ -0.46
SEC13-205ENST00000397101 ABCA1O95477 2261 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.15□□□□□ -0.46
SEC13-205ENST00000397101 SAC3D1A6NKF1 404 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 FAAHO00519 579 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 FFAR1O14842 300 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 KLF4O43474 513 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 TP53P04637 393 aaPredicted RBP12.15□□□□□ -0.46
SEC13-205ENST00000397101 PEPDP12955 493 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 HTR3AP46098 478 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 POLR2HP52434 150 aaKnown RBP12.15□□□□□ -0.46
SEC13-205ENST00000397101 SLC34A1Q06495 639 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 FOXF1Q12946 379 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 RIPK1Q13546 671 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 GUSBP1Q15486 140 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 EXOC3L2Q2M3D2 409 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 ZNF730Q6ZMV8 503 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 C22orf34Q6ZV56 151 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 CHMP1BQ7LBR1 199 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 GRINAQ7Z429 371 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 LSMEM1Q8N8F7 131 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 OR5M1Q8NGP8 315 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 ZNF845Q96IR2 970 aaPredicted RBP12.15□□□□□ -0.46
SEC13-205ENST00000397101 KLHDC3Q9BQ90 382 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 PIGQQ9BRB3 760 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 REG4Q9BYZ8 158 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 OPN3Q9H1Y3 402 aaPredicted RBP12.15□□□□□ -0.46
SEC13-205ENST00000397101 OR10A4Q9H209 315 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 RNF122Q9H9V4 155 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 STX18Q9P2W9 335 aaKnown RBP12.15□□□□□ -0.46
SEC13-205ENST00000397101 ZNF175Q9Y473 711 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 ROS1P08922 2347 aa12.15□□□□□ -0.46
SEC13-205ENST00000397101 TMED7-TICAM2A0A0A6YYA0 188 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 A0A0B4J2E0 115 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 A0A1B0GX12 115 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 SHISA8B8ZZ34 492 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 LINC01387J3KSC0 135 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 OVOL3O00110 214 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 HS3ST1O14792 307 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 CHP2O43745 196 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 ZIC3O60481 467 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 CCNB2O95067 398 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 THBDP07204 575 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 THRBP10828 461 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 PNMTP11086 282 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 PRKCAP17252 672 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 PTNP21246 168 aa12.14□□□□□ -0.47
SEC13-205ENST00000397101 IDUAP35475 653 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms