RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 LOC100509620A0A075B734 347 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 A0A1B0GWA3 101 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 FZD7O75084 574 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 CALCBP10092 127 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 EN2P19622 333 aaPredicted RBP14.47□□□□□ -0.09
GNE-202ENST00000396594 ZP2Q05996 745 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 MBTPS1Q14703 1052 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 MOB3CQ70IA8 216 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 C12orf45Q8N5I9 185 aaPredicted RBP14.47□□□□□ -0.09
GNE-202ENST00000396594 STK35Q8TDR2 534 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 OCSTAMPQ9BR26 566 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 ERVK13-1Q9NX77 482 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 GRPRP30550 384 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 NKAIN1Q4KMZ8 207 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 C1orf140Q5VVS0 124 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 TMPRSS9Q7Z410 1059 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 MAML2Q8IZL2 1156 aaPredicted RBP14.47□□□□□ -0.09
GNE-202ENST00000396594 ZNF784Q8NCA9 323 aaPredicted RBP14.47□□□□□ -0.09
GNE-202ENST00000396594 C1orf123Q9NWV4 160 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 CD300AQ9UGN4 299 aa14.47□□□□□ -0.09
GNE-202ENST00000396594 A6NHS1 94 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 HBE1P02100 147 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 CYC1P08574 325 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 PSMB5P28074 263 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 GABREP78334 506 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 DNASE1L3Q13609 305 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 AGAP7PQ5VUJ5 663 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 AGAP6Q5VW22 663 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 CGB2Q6NT52 195 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 MRGPRX4Q96LA9 322 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 AGAP4Q96P64 663 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 USP36Q9P275 1121 aaKnown RBP14.46□□□□□ -0.09
GNE-202ENST00000396594 CCL26Q9Y258 94 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 GABRPO00591 440 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 RFPL3O75679 317 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 LGI1O95970 557 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 MTHFD2P13995 350 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 MAN2A2P49641 1150 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 TMEM176BQ3YBM2 270 aaPredicted RBP14.46□□□□□ -0.09
GNE-202ENST00000396594 OTUD1Q5VV17 481 aaPredicted RBP14.46□□□□□ -0.09
GNE-202ENST00000396594 IL20RBQ6UXL0 311 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 RPS19BP1Q86WX3 136 aaKnown RBP14.46□□□□□ -0.09
GNE-202ENST00000396594 LKAAEAR1Q8TD35 194 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 DEDD2Q8WXF8 326 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 OR51J1Q9H342 316 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 CXorf36Q9H7Y0 433 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 B3GNT2Q9NY97 397 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 TMA7Q9Y2S6 64 aaKnown RBP14.46□□□□□ -0.09
GNE-202ENST00000396594 FANCGO15287 622 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 FZD6O60353 706 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 PVRP15151 417 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 CD1CP29017 333 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 IL2RGP31785 369 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 OR1D4P47884 311 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 NCS1P62166 190 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 PRR22Q8IZ63 422 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 BEST4Q8NFU0 473 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 OR56B2PQ8NGI1 322 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 GLYATL2Q8WU03 294 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 SORBS1Q9BX66 1292 aaKnown RBP14.46□□□□□ -0.09
GNE-202ENST00000396594 TTTY10Q9BZA0 68 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 SLC25A19Q9HC21 320 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 SLC17A4Q9Y2C5 497 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 KIAA1551Q9HCM1 1747 aa14.46□□□□□ -0.09
GNE-202ENST00000396594 IRS1P35568 1242 aa14.46□□□□□ -0.1
GNE-202ENST00000396594 RPL27P61353 136 aaKnown RBP14.46□□□□□ -0.1
GNE-202ENST00000396594 ALKBH1Q13686 389 aaKnown RBP14.46□□□□□ -0.1
GNE-202ENST00000396594 IHHQ14623 411 aa14.46□□□□□ -0.1
GNE-202ENST00000396594 PLGLAQ15195 96 aa14.46□□□□□ -0.1
GNE-202ENST00000396594 VASNQ6EMK4 673 aa14.46□□□□□ -0.1
GNE-202ENST00000396594 CSF3RQ99062 836 aa14.46□□□□□ -0.1
GNE-202ENST00000396594 TSNAXQ99598 290 aaKnown RBP14.46□□□□□ -0.1
GNE-202ENST00000396594 SLC25A21Q9BQT8 299 aaPredicted RBP14.46□□□□□ -0.1
GNE-202ENST00000396594 SOX17Q9H6I2 414 aaPredicted RBP14.46□□□□□ -0.1
GNE-202ENST00000396594 POLE4Q9NR33 117 aa14.46□□□□□ -0.1
GNE-202ENST00000396594 USP22Q9UPT9 525 aa14.46□□□□□ -0.1
GNE-202ENST00000396594 HTR2CP28335 458 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 CSNK1EP49674 416 aaKnown RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 EMX1Q04741 257 aaPredicted RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 GDF7Q7Z4P5 450 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 SYS1Q8N2H4 156 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 TMEM151AQ8N4L1 468 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 ZNF582Q96NG8 517 aaPredicted RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 TP63Q9H3D4 680 aaPredicted RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 OBP2BQ9NPH6 170 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 EBF1Q9UH73 591 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 KIR2DS1A0A191URI9 304 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 FRG2CA6NGY1 282 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 CSF2P04141 144 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 KIR2DS4P43632 304 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 EPHA5P54756 1037 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 CLDN17P56750 224 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 DMWDQ09019 674 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 KIR2DS1Q14954 304 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 FAM83FQ8NEG4 500 aaPredicted RBP14.45□□□□□ -0.1
GNE-202ENST00000396594 POC1BQ8TC44 478 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 MYLIPQ8WY64 445 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 KATNB1Q9BVA0 655 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 TMEM59Q9BXS4 323 aa14.45□□□□□ -0.1
GNE-202ENST00000396594 GMPR2Q9P2T1 348 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms