RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 DNAJC1Q96KC8 554 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF75AQ96N20 296 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 ZFP3Q96NJ6 502 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 RNF2Q99496 336 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 DCUN1D5Q9BTE7 237 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 UPF3AQ9H1J1 476 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 DEFB129Q9H1M3 183 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 ATP13A3Q9H7F0 1226 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 NHEJ1Q9H9Q4 299 aaPredicted RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 FGF20Q9NP95 211 aaPredicted RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 TMEM30AQ9NV96 361 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 C19orf25Q9UFG5 118 aaPredicted RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 LSM7Q9UK45 103 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 MAN1B1Q9UKM7 699 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 TCF19Q9Y242 345 aa4.26□□□□□ -1.73
GABPB1-204ENST00000396464 TBL2Q9Y4P3 447 aaKnown RBP4.26□□□□□ -1.73
GABPB1-204ENST00000396464 IFT140Q96RY7 1462 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ARID2Q68CP9 1835 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 LRRN3E7EW58 273 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 GOSR2O14653 212 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 SIGLEC5O15389 551 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 INSIG1O15503 277 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 RCBTB2O95199 551 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ANGPTL1O95841 491 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 JCHAINP01591 159 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 GOLGA8HP0CJ92 632 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 SLC35E2P0CK97 266 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 PET100P0DJ07 73 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 FGF3P11487 239 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 BCKDHAP12694 445 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ABOP16442 354 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 CALCRP30988 508 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 RFX5P48382 616 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 SERPINB9P50453 376 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 RASSF2P50749 326 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 MRPS25P82663 173 aaKnown RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 CYP24A1Q07973 514 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 RIPPLY1Q0D2K3 151 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 RIGQ13278 110 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 GTF2H2Q13888 395 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 OR4D1Q15615 310 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 INPP5JQ15735 1006 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 C5orf64Q2M2E5 130 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 TIGITQ495A1 244 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 GTF2H2CQ6P1K8 395 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 PRSS57Q6UWY2 283 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 Q6ZVQ6 151 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 OR2W3Q7Z3T1 314 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 TSEN54Q7Z6J9 526 aaKnown RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF547Q8IVP9 402 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ATP6V0D2Q8N8Y2 350 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 OR8K1Q8NGG5 319 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 FBXO25Q8TCJ0 367 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 CYP2S1Q96SQ9 504 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 RAB34Q9BZG1 259 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 TSGA10Q9BZW7 698 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 TOLLIPQ9H0E2 274 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 PLEKHA1Q9HB21 404 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 TUBA8Q9NY65 449 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 USE1Q9NZ43 259 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 MAT2BQ9NZL9 334 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 GALPQ9UBC7 116 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ELF5Q9UKW6 265 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 DHRS7Q9Y394 339 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 SAR1BQ9Y6B6 198 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 CFAP65Q6ZU64 1925 aaKnown RBP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 ZMYM2Q9UBW7 1377 aa4.25□□□□□ -1.73
GABPB1-204ENST00000396464 AQRO60306 1485 aaKnown RBP eCLIP4.25□□□□□ -1.73
GABPB1-204ENST00000396464 NEDD4P46934 1319 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 CUL7Q14999 1698 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 LOC105371267A0A1B0GV96 52 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 OR5H15A6NDH6 313 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 GLTPD2A6NH11 291 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 MYMKA6NI61 221 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 LINC01548A6NM66 108 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 E5RJQ4 531 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 SLCO1B7G3V0H7 640 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 PFKFB2O60825 505 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 TNFAIP8O95379 198 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 NADKO95544 446 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 HOXB6P17509 224 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 POLR2EP19388 210 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 EFNA1P20827 205 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 C21orf33P30042 268 aaPredicted RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 TNFSF9P41273 254 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 XCR1P46094 333 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 NUP107P57740 925 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 MAGOHP61326 146 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 RPS13P62277 151 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 MRPS22P82650 360 aaKnown RBP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 SRSF1Q07955 248 aaKnown RBP eCLIP4.24□□□□□ -1.73
GABPB1-204ENST00000396464 SCRN3Q0VDG4 424 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 BNIP2Q12982 314 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 RAB35Q15286 201 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 DUSP7Q16829 419 aa4.24□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF672Q499Z4 452 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms