RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 HNRNPCL4P0DMR1 293 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 IL7RP16871 459 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 PPIBP23284 216 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 PAX7P23759 505 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 IL32P24001 234 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 IDH2P48735 452 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 ATP4BP51164 291 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 POLR2HP52434 150 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 CASP9P55211 416 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 DSTNP60981 165 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 SLC35A1P78382 337 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 EPS8Q12929 822 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 TAB1Q15750 504 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 ETFDHQ16134 617 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 SLC9B1Q4ZJI4 515 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 Q5PR19 223 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 MRPL2Q5T653 305 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 FBXW9Q5XUX1 488 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 PAQR6Q6TCH4 344 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 EPGNQ6UW88 154 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 ZNF621Q6ZSS3 439 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 LHFPL2Q6ZUX7 228 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 BHLHA15Q7RTS1 189 aaPredicted RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 MIER2Q8N344 545 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 C17orf78Q8N4C9 275 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 ANKFN1Q8N957 763 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 C1orf162Q8NEQ5 155 aaPredicted RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 RFWD2Q8NHY2 731 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 ZNF563Q8TA94 476 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 TMEM171Q8WVE6 324 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 CNOT9Q92600 299 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 GTF2H4Q92759 462 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 TMEM45BQ96B21 275 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 DDIT4LQ96D03 193 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 RADILQ96JH8 1075 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 ARL5BQ96KC2 179 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 OR52B2Q96RD2 323 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 PAIP2Q9BPZ3 127 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 INPP5KQ9BT40 448 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 CCDC28BQ9BUN5 200 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 SF3B5Q9BWJ5 86 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 PAIP1Q9H074 479 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 CXorf56Q9H5V9 222 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 EVA1AQ9H8M9 152 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 UBTD1Q9HAC8 227 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 TPT1P8Q9HAU6 139 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 C12orf10Q9HB07 376 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 A4GALTQ9NPC4 353 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 SLC6A13Q9NSD5 602 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 OSGIN1Q9UJX0 560 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 SLC9A8Q9Y2E8 581 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 IFT52Q9Y366 437 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 RNF115Q9Y4L5 304 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 TRBV5-3A0A0A0MS03 114 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 TMED7-TICAM2A0A0A6YYA0 188 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 IGHV3-15A0A0B4J1V0 119 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 TMEM247A6NEH6 219 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 CLDN24A6NM45 220 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 AP3D1O14617 1153 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 NPIPB7O75200 414 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 VAMP5O95183 116 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ADAP00813 363 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 C1QCP02747 245 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 BCHEP06276 602 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 HEXAP06865 529 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 DANCRP0C864 163 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 NR2F1P10589 423 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ETFAP13804 333 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ETS2P15036 469 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 CPEP16870 476 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 GGT1P19440 569 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 TACR3P29371 465 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ACAA2P42765 397 aaKnown RBP5.39□□□□□ -1.55
PTPN20-208ENST00000395727 PTH2RP49190 550 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 POLR2JP52435 117 aaKnown RBP5.39□□□□□ -1.55
PTPN20-208ENST00000395727 SLC17A1Q14916 467 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 LARS2Q15031 903 aaKnown RBP5.39□□□□□ -1.55
PTPN20-208ENST00000395727 RGNQ15493 299 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ZNF672Q499Z4 452 aaPredicted RBP5.39□□□□□ -1.55
PTPN20-208ENST00000395727 WBP2NLQ6ICG8 309 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 OR7E24Q6IFN5 339 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 C5orf46Q6UWT4 87 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 C6orf89Q6UWU4 347 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ZNF836Q6ZNA1 936 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 OLIG3Q7RTU3 272 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 DTX2Q86UW9 622 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 P3H2Q8IVL5 708 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ZNF433Q8N7K0 673 aaPredicted RBP5.39□□□□□ -1.55
PTPN20-208ENST00000395727 LSMEM1Q8N8F7 131 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 CLRN3Q8NCR9 226 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 OR5AN1Q8NGI8 311 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 OR52P1PQ8NH57 321 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 LILRB1Q8NHL6 650 aaPredicted RBP5.39□□□□□ -1.55
PTPN20-208ENST00000395727 BBS10Q8TAM1 723 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 SLC38A5Q8WUX1 472 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 VPS33AQ96AX1 596 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 APH1AQ96BI3 265 aa5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ZC3HAV1LQ96H79 300 aaKnown RBP5.39□□□□□ -1.55
PTPN20-208ENST00000395727 ATP6V1G3Q96LB4 118 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms