RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 IDH3BO43837 385 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 PRKYO43930 277 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 PPP1R3DO95685 299 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 TXNDC12O95881 172 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 ACTL6AO96019 429 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 STARP49675 285 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 CHN2P52757 468 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 CLDN18P56856 261 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 OR2B6P58173 313 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 FOXK2Q01167 660 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 MS4A18Q3C1V0 323 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 TMEM201Q5SNT2 666 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 ZNF362Q5T0B9 420 aaPredicted RBP13.56□□□□□ -0.24
PTPN20-206ENST00000395722 FAM122BQ7Z309 247 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 FAM26EQ8N5C1 309 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 SLC38A2Q96QD8 506 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 TEX12Q9BXU0 123 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 PRORYQ9H606 182 aa13.56□□□□□ -0.24
PTPN20-206ENST00000395722 CFAP47Q6ZTR5 3102 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 MGAQ8IWI9 3026 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 A0A1W2PNV4 684 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 IMPA2O14732 288 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 ZNF708P17019 499 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 GTF2E2P29084 291 aaKnown RBP13.55□□□□□ -0.24
PTPN20-206ENST00000395722 AGFG1P52594 562 aaKnown RBP13.55□□□□□ -0.24
PTPN20-206ENST00000395722 SUCLG1P53597 346 aaKnown RBP13.55□□□□□ -0.24
PTPN20-206ENST00000395722 CSNK2A1P68400 391 aaPredicted RBP13.55□□□□□ -0.24
PTPN20-206ENST00000395722 SNAPC1Q16533 368 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 C6orf141Q5SZD1 244 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 VASNQ6EMK4 673 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 ARHGAP11AQ6P4F7 1023 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 PAQR6Q6TCH4 344 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 NHLRC1Q6VVB1 395 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 PTCHD4Q6ZW05 846 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 IGFN1Q86VF2 1251 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 TCEANCQ8N8B7 351 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 OR2V1Q8NHB1 315 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 CNIH3Q8TBE1 160 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 TMEM163Q8TC26 289 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 SMPDL3BQ92485 455 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 HDAC2Q92769 488 aaKnown RBP13.55□□□□□ -0.24
PTPN20-206ENST00000395722 KATNB1Q9BVA0 655 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 DEFB127Q9H1M4 99 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 CMC2Q9NRP2 79 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 RASSF1Q9NS23 344 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 AASSQ9UDR5 926 aa13.55□□□□□ -0.24
PTPN20-206ENST00000395722 LOC102725191A0A1B0GVB3 256 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 A0A1B0GVC2 190 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 NPIPB13A6NJU9 1138 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 AQP7P3A6NL99 342 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 NPIPB4C9JG80 1138 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 H0YC42 278 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 TFECO14948 347 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-206ENST00000395722 AKR7A3O95154 331 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 IGHMP01871 453 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 ADORA3P0DMS8 318 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 RPL4P36578 427 aaKnown RBP13.54□□□□□ -0.24
PTPN20-206ENST00000395722 CTXN1P60606 82 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 RAC3P60763 192 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 CXCR4P61073 352 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 PUDPQ08623 228 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 PLEKHN1Q494U1 663 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-206ENST00000395722 TMEM99Q8N816 258 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 C9orf43Q8TAL5 461 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-206ENST00000395722 ZNF566Q969W8 418 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 ERMAPQ96PL5 475 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-206ENST00000395722 YTHDF1Q9BYJ9 559 aaKnown RBP13.54□□□□□ -0.24
PTPN20-206ENST00000395722 INIPQ9NRY2 104 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 B3GAT1Q9P2W7 334 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 ADAM18Q9Y3Q7 739 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 IER3IP1Q9Y5U9 82 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 ZNF407Q9C0G0 2248 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 TRGV5A0A0B4J1U4 118 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 TRIM64A6NGJ6 449 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 ZNF814B7Z6K7 855 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 TNFSF11O14788 317 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 EIF1BO60739 113 aaKnown RBP13.54□□□□□ -0.24
PTPN20-206ENST00000395722 F13BP05160 661 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 ERVK-25P63136 954 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 OCLNQ16625 522 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 GPR139Q6DWJ6 353 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 ABTB1Q969K4 478 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-206ENST00000395722 CRELD1Q96HD1 420 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 IL4I1Q96RQ9 567 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 SRXN1Q9BYN0 137 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 FN3KQ9H479 309 aa13.54□□□□□ -0.24
PTPN20-206ENST00000395722 KIAA1549Q9HCM3 1950 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 EIF1AYO14602 144 aaKnown RBP13.53□□□□□ -0.24
PTPN20-206ENST00000395722 OR6A2O95222 327 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 SLC2A10O95528 541 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 FAM87AP0C7U9 286 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 KLK2P20151 261 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 EMC4Q5J8M3 183 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 HBMQ6B0K9 141 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 ZNF786Q8N393 782 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 ANKK1Q8NFD2 765 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 OR10D3Q8NH80 312 aa13.53□□□□□ -0.24
PTPN20-206ENST00000395722 PNPLA2Q96AD5 504 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms