RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 GAAP10253 952 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 CEBPBP17676 345 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 C4BPBP20851 252 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 EMDP50402 254 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF234Q14588 700 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 PON3Q15166 354 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 FAM69AQ5T7M9 428 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 OR4C16Q8NGL9 310 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 SMARCD2Q92925 531 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 SLC38A3Q99624 504 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 CERS4Q9HA82 394 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 TMEM27Q9HBJ8 222 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 SERGEFQ9UGK8 458 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 DPP4P27487 766 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 PEBP1P30086 187 aaKnown RBP13.12□□□□□ -0.31
CLIP2-203ENST00000395060 AP3S2P59780 193 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 ARHGAP19Q14CB8 494 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 TRAM1Q15629 374 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 HACD4Q5VWC8 232 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF626Q68DY1 528 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF660Q6AZW8 331 aaPredicted RBP13.12□□□□□ -0.31
CLIP2-203ENST00000395060 PWWP2BQ6NUJ5 590 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 SEZ6L2Q6UXD5 910 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF761Q86XN6 746 aaPredicted RBP13.12□□□□□ -0.31
CLIP2-203ENST00000395060 MRPS24Q96EL2 167 aaKnown RBP13.12□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF75AQ96N20 296 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 EXO5Q9H790 373 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 TAS2R5Q9NYW4 299 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.12□□□□□ -0.31
CLIP2-203ENST00000395060 TRAV1-2A0A0B4J238 106 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 KRBOX1C9JBD0 128 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 F5H5P2 479 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 BET1O15155 118 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 F12P00748 615 aaPredicted RBP13.12□□□□□ -0.31
CLIP2-203ENST00000395060 HIST1H2ABP04908 130 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 SLC2A5P22732 501 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 ART1P52961 327 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 HIST3H2AQ7L7L0 130 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 FAM219AQ8IW50 185 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 OR6V1Q8N148 313 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 OR4K14Q8NGD5 310 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 OR51D1Q8NGF3 324 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 RGP1Q92546 391 aaPredicted RBP13.12□□□□□ -0.31
CLIP2-203ENST00000395060 HIST1H2ACQ93077 130 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 LMF1Q96S06 567 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 NPAS1Q99742 590 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 HPF1Q9NWY4 346 aa13.12□□□□□ -0.31
CLIP2-203ENST00000395060 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
CLIP2-203ENST00000395060 TRAV18A0A075B6X5 111 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 TBC1D3EA0A087X179 549 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 IFNGP01579 166 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 MC2RQ01718 297 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 CSRP2Q16527 193 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 POMZP3Q6PJE2 187 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 TFAP2EQ6VUC0 442 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 C7orf50Q9BRJ6 194 aaKnown RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ZCCHC4Q9H5U6 513 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 EXOSC3Q9NQT5 275 aaKnown RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ACSL5Q9ULC5 683 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 MRPS2Q9Y399 296 aaKnown RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 OR6C68A6NDL8 312 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 A8MXK9 166 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 M0QYG6 137 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 AIPO00170 330 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 PRAF2O60831 178 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ANXA2P07355 339 aaKnown RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ERGP11308 486 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 PPP3CBP16298 524 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ADRA2CP18825 462 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 STARP49675 285 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 PPP2CBP62714 309 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 TRA2BP62995 288 aaKnown RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 PPP2CAP67775 309 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 SQSTM1Q13501 440 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 RUNX2Q13950 521 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF169Q14929 603 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF77Q15935 545 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 CMIPQ8IY22 773 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 TMEM52Q8NDY8 209 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 PRSS16Q9NQE7 514 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 TRAV8-7A0A075B6U6 113 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ANKRD20A5PA0PJZ0 165 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 OR2M5A3KFT3 312 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 D6RAR5 112 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 GSTZ1O43708 216 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 EML2O95834 649 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ECDO95905 644 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 CD3DP04234 171 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 CT62P0C5K7 136 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 NID1P14543 1247 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 PVRP15151 417 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 LUMP51884 338 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 RAG2P55895 527 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 PLAURQ03405 335 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 FAM53BQ14153 422 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms