RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TMEM168Q9H0V1 697 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 RXFP3Q9NSD7 469 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ACSS1Q9NUB1 689 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ACSL5Q9ULC5 683 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 MAN2B1O00754 1011 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 CDC40O60508 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 EML2O95834 649 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 EGFP01133 1207 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 DCNP07585 359 aaKnown RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 SLC6A1P30531 599 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 UBE3DQ7Z6J8 389 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 KRT77Q7Z794 578 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 IQCF2Q8IXL9 164 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF101Q8IZC7 436 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 TTLQ8NG68 377 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 HERVK_113Q902F9 699 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 HSD17B8Q92506 261 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 MS4A6EQ96DS6 147 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 NKX2-4Q9H2Z4 354 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 APOBEC3BQ9UH17 382 aaKnown RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 CFAP54Q96N23 3096 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 A0A0A6YYC8 382 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 B4DGG1 531 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 F5H5P2 479 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 I3L1I5 382 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 SCGB1D2O95969 90 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 F3P13726 295 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 CDK2P24941 298 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 LSSP48449 732 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 LUMP51884 338 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 TAS2R43P59537 309 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 OR7E24Q6IFN5 339 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 CAMKMTQ7Z624 323 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 NR2C2APQ86WQ0 139 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 SHISA5Q8N114 240 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 INO80EQ8NBZ0 244 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 OR5AK2Q8NH90 309 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 RAB7BQ96AH8 199 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 C5orf34Q96MH7 638 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 SFXN1Q9H9B4 322 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 HRASLSQ9HDD0 168 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 PCDHB16Q9NRJ7 776 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 GRHPRQ9UBQ7 328 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 TBC1D29Q9UFV1 150 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 PLCL2Q9UPR0 1127 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 SPTBN5Q9NRC6 3674 aaKnown RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 CDK2AP1O14519 115 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 SRMP19623 302 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 LRRC69Q6ZNQ3 347 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 SHISA6Q6ZSJ9 500 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 ACBD4Q8NC06 268 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 MORN4Q8NDC4 146 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 OR52R1Q8NGF1 315 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 NPRL2Q8WTW4 380 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 HHIPQ96QV1 700 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 APOOQ9BUR5 198 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 LHX9Q9NQ69 397 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 DLL4Q9NR61 685 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 C4orf47A7E2U8 309 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 NPIPB8E9PQR5 432 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 ATP1B1P05026 303 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 FPR3P25089 353 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 CCR9P51686 369 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 RPS21P63220 83 aaKnown RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 REEP5Q00765 189 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 TAGLNQ01995 201 aaKnown RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 GAB4Q2WGN9 574 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 ADAMTSL4Q6UY14 1074 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 IDO2Q6ZQW0 420 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF765Q7L2R6 523 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 OR9A4Q8NGU2 314 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 GOT1L1Q8NHS2 421 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 SEC61A2Q9H9S3 476 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 CLDND1Q9NY35 253 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 CKLFQ9UBR5 152 aa12.16□□□□□ -0.46
NFKB1-202ENST00000394820 CGGBP1Q9UFW8 167 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 TESQ9UGI8 421 aaKnown RBP12.16□□□□□ -0.46
NFKB1-202ENST00000394820 A0A1W2PPV9 198 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 C4orf51C9J302 202 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 SOX1O00570 391 aaPredicted RBP12.15□□□□□ -0.46
NFKB1-202ENST00000394820 HCRTR2O43614 444 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
NFKB1-202ENST00000394820 TMIGD3P0DMS9 266 aaPredicted RBP12.15□□□□□ -0.46
NFKB1-202ENST00000394820 ARFIP1P53367 373 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 CD276Q5ZPR3 534 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 OR52N1Q8NH53 320 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 MS4A4EQ96PG1 132 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 PELI2Q9HAT8 420 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 FGF20Q9NP95 211 aaPredicted RBP12.15□□□□□ -0.46
NFKB1-202ENST00000394820 CA10Q9NS85 328 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 EDARQ9UNE0 448 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 IGKV1-8A0A0C4DH67 115 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 hCG_1807616A0A1W2PRN6 198 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 SERTM1A2A2V5 107 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 CTNSO60931 367 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 CLEC3AO75596 197 aa12.15□□□□□ -0.46
NFKB1-202ENST00000394820 CBX7O95931 251 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms