RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OR2AT4A6NND4 320 aa14.83□□□□□ -0.03
PCDH1-203ENST00000394536 CDC40O60508 579 aaKnown RBP eCLIP14.83□□□□□ -0.03
PCDH1-203ENST00000394536 EML2O95834 649 aa14.83□□□□□ -0.03
PCDH1-203ENST00000394536 THBS1P07996 1170 aa14.83□□□□□ -0.03
PCDH1-203ENST00000394536 HRASLSQ9HDD0 168 aa14.83□□□□□ -0.03
PCDH1-203ENST00000394536 A0A1B0GTH9 108 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 B8ZZF3 427 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 APBB3O95704 486 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 GUCA1AP43080 201 aaPredicted RBP14.83□□□□□ -0.04
PCDH1-203ENST00000394536 GPR148Q8TDV2 347 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 CCDC107Q8WV48 283 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 YIPF5Q969M3 257 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 SYT4Q9H2B2 425 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 LINC01553A4QN01 128 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 PLPP2O43688 288 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 ZGLP1P0C6A0 271 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 CDK2P24941 298 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 SORDQ00796 357 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 KCNAB1Q14722 419 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 OR5M10Q6IEU7 315 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 KIRREL2Q6UWL6 708 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 WDR88Q6ZMY6 472 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 PDZD9Q8IXQ8 264 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 C9orf62Q8N4C0 152 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 AVL9Q8NBF6 648 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 C15orf40Q8WUR7 153 aa14.83□□□□□ -0.04
PCDH1-203ENST00000394536 C7orf50Q9BRJ6 194 aaKnown RBP14.83□□□□□ -0.04
PCDH1-203ENST00000394536 MRTO4Q9UKD2 239 aaKnown RBP14.83□□□□□ -0.04
PCDH1-203ENST00000394536 PRAF2O60831 178 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 PBX2P40425 430 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 DLX5P56178 289 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 FXYD6P3P58550 94 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 OR7E24Q6IFN5 339 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 ETFBKMTQ8IXQ9 262 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 SLC35F3Q8IY50 421 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF101Q8IZC7 436 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 RFLNBQ8N5W9 214 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 SEC22AQ96IW7 307 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 TGM7Q96PF1 710 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 FAM83CQ9BQN1 747 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 RSPO3Q9BXY4 272 aaPredicted RBP14.82□□□□□ -0.04
PCDH1-203ENST00000394536 SFXN1Q9H9B4 322 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 SEC61A2Q9H9S3 476 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 ADGRL4Q9HBW9 690 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 SLC22A7Q9Y694 548 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 OR14I1A6ND48 311 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 GPRIN2O60269 458 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 KCNJ13O60928 360 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 IGHA1P01876 353 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 BDH1Q02338 343 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 USP53Q70EK8 1073 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 MICU1Q9BPX6 476 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 IFT46Q9NQC8 304 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 DHDHQ9UQ10 334 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 LAMA2P24043 3122 aaKnown RBP14.82□□□□□ -0.04
PCDH1-203ENST00000394536 IFITM5A6NNB3 132 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 EGFP01133 1207 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF35P13682 527 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 MAOAP21397 527 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 HNRNPA2B1P22626 353 aaKnown RBP14.82□□□□□ -0.04
PCDH1-203ENST00000394536 TSFMP43897 325 aaKnown RBP14.82□□□□□ -0.04
PCDH1-203ENST00000394536 PRPS1P60891 318 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 MRM1Q6IN84 353 aaKnown RBP14.82□□□□□ -0.04
PCDH1-203ENST00000394536 TTLL10Q6ZVT0 673 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 TMPRSS9Q7Z410 1059 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 CD163Q86VB7 1156 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 FAM46BQ96A09 425 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 MRPS18AQ9NVS2 196 aaKnown RBP14.82□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF337Q9Y3M9 751 aa14.82□□□□□ -0.04
PCDH1-203ENST00000394536 F5H0A9 414 aaPredicted RBP14.81□□□□□ -0.04
PCDH1-203ENST00000394536 F5H5P2 479 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 SPI1P17947 270 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 FRKP42685 505 aaPredicted RBP14.81□□□□□ -0.04
PCDH1-203ENST00000394536 CDNFQ49AH0 187 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 HACD4Q5VWC8 232 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF681Q96N22 645 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 CYP8B1Q9UNU6 501 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 EEF1E1-BLOC1S5C9J1V9 151 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 ADPRHP54922 357 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 NDUFAF7Q7L592 441 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 NLRC3Q7RTR2 1065 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 SLC38A6Q8IZM9 456 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 RBPMSQ93062 196 aaKnown RBP14.81□□□□□ -0.04
PCDH1-203ENST00000394536 NRSN2Q9GZP1 204 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 MEPEQ9NQ76 525 aaPredicted RBP14.81□□□□□ -0.04
PCDH1-203ENST00000394536 KCNN3Q9UGI6 736 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 NAP1L6A6NFF2 107 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 LEUTXA8MZ59 168 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 LGALS8O00214 317 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 IMPA2O14732 288 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 SC5DO75845 299 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 RAB3DO95716 219 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 CT62P0C5K7 136 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF85Q03923 595 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 ZIC1Q15915 447 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 MCATQ8IVS2 390 aaKnown RBP14.81□□□□□ -0.04
PCDH1-203ENST00000394536 ARIH2OSQ8N7S6 290 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 INO80EQ8NBZ0 244 aaPredicted RBP14.81□□□□□ -0.04
PCDH1-203ENST00000394536 RNF170Q96K19 258 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 SLC6A7Q99884 636 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms