RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 A0A1W2PQD3 144 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 TMEM72A0PK05 275 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 ISPDA4D126 451 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 FABP12A6NFH5 140 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 TVP23AA6NH52 213 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 OR6C76A6NM76 312 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 CPNE3O75131 537 aaKnown RBP13.67□□□□□ -0.22
GPC3-202ENST00000394299 BGLAPP02818 100 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 GP1BBP13224 206 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 CCL4P13236 92 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 MAGEB1P43366 347 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 COL28A1Q2UY09 1125 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 GLYR1Q49A26 553 aaPredicted RBP13.67□□□□□ -0.22
GPC3-202ENST00000394299 MESTQ5EB52 335 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 IL20RBQ6UXL0 311 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 NANOGNBQ7Z5D8 188 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 JAZF1Q86VZ6 243 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 KDM8Q8N371 416 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 SNX33Q8WV41 574 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 LIPHQ8WWY8 451 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 METTL21AQ8WXB1 218 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 ORAI1Q96D31 301 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 WDFY2Q96P53 400 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 GPX7Q96SL4 187 aaPredicted RBP13.67□□□□□ -0.22
GPC3-202ENST00000394299 ALG12Q9BV10 488 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 SEMA4CQ9C0C4 833 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 ST6GALNAC2Q9UJ37 374 aa13.67□□□□□ -0.22
GPC3-202ENST00000394299 TMED7-TICAM2A0A0A6YYA0 188 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 SHISA8B8ZZ34 492 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 MEN1O00255 615 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 EIF4E2O60573 245 aaKnown RBP13.66□□□□□ -0.22
GPC3-202ENST00000394299 OR2T7P0C7T2 308 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 PGCP20142 388 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 IL11P20809 199 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 TCEA1P23193 301 aaKnown RBP13.66□□□□□ -0.22
GPC3-202ENST00000394299 AHCYP23526 432 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 APEX1P27695 318 aaKnown RBP13.66□□□□□ -0.22
GPC3-202ENST00000394299 SLC6A8P48029 635 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 GPR50Q13585 617 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 DMKNQ6E0U4 476 aaPredicted RBP13.66□□□□□ -0.22
GPC3-202ENST00000394299 SLC43A2Q8N370 569 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 OR2T27Q8NH04 317 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 PDCD1LG2Q9BQ51 273 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 CRB3Q9BUF7 120 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 PTDSS2Q9BVG9 487 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 MED11Q9P086 117 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 NCDNQ9UBB6 729 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 GRHPRQ9UBQ7 328 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 TMED7Q9Y3B3 224 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 TNRC6BQ9UPQ9 1833 aaKnown RBP13.66□□□□□ -0.22
GPC3-202ENST00000394299 A0A1B0GVC2 190 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 A6NIN4 97 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 SUSD5O60279 629 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 SDHAP31040 664 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 P2RX1P51575 399 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 POU4F2Q12837 409 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 CBFBQ13951 182 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 INPP5JQ15735 1006 aaPredicted RBP13.66□□□□□ -0.22
GPC3-202ENST00000394299 ACSM3Q53FZ2 586 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 IDNKQ5T6J7 187 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 DDI2Q5TDH0 399 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 OR6V1Q8N148 313 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 UBE2J2Q8N2K1 259 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 NEDD4LQ96PU5 975 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 GFM1Q96RP9 751 aaKnown RBP13.66□□□□□ -0.22
GPC3-202ENST00000394299 IER2Q9BTL4 223 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 SACM1LQ9NTJ5 587 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 KLHDC2Q9Y2U9 406 aa13.66□□□□□ -0.22
GPC3-202ENST00000394299 GPR179Q6PRD1 2367 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 CACNA1CQ13936 2221 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 OR6C70A6NIJ9 312 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 VSTM2BA6NLU5 285 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 HIST1H2ABP04908 130 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 NRG3P56975 720 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 ACTC1P68032 377 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 ACTA1P68133 377 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 GGTLC2Q14390 218 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 P2RY14Q15391 338 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 ARSKQ6UWY0 536 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 CCBE1Q6UXH8 406 aaPredicted RBP13.65□□□□□ -0.22
GPC3-202ENST00000394299 HIST3H2AQ7L7L0 130 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 GPALPP1Q8IXQ4 340 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 CELF2-AS1Q8N7Q2 184 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 EXD3Q8N9H8 876 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 HIST1H2ACQ93077 130 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 CCNL2Q96S94 520 aaPredicted RBP13.65□□□□□ -0.22
GPC3-202ENST00000394299 COQ7Q99807 217 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 ING1Q9UK53 422 aaPredicted RBP13.65□□□□□ -0.22
GPC3-202ENST00000394299 POLHQ9Y253 713 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 VDAC3Q9Y277 283 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 ARHGEF9O43307 516 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 TMCC2O75069 709 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 GLCEO94923 617 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 IL7P13232 177 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 LGALS3BPQ08380 585 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.65□□□□□ -0.224e-18■□□□□ 10.9
GPC3-202ENST00000394299 CNIH2Q6PI25 160 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 CPEB2Q7Z5Q1 589 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms