RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 RBM4Q9BWF3 364 aaKnown RBP16.55■□□□□ 0.24
SNCB-202ENST00000393693 MED17Q9NVC6 651 aa16.55■□□□□ 0.24
SNCB-202ENST00000393693 FBXO34Q9NWN3 711 aa16.55■□□□□ 0.24
SNCB-202ENST00000393693 RAB26Q9ULW5 256 aa16.55■□□□□ 0.24
SNCB-202ENST00000393693 ALG1L2C9J202 215 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 PDLIM1O00151 329 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 TNFRSF11BO00300 401 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 SOCS2O14508 198 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 DIRAS1O95057 198 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 RPS4Y1P22090 263 aaKnown RBP16.54■□□□□ 0.24
SNCB-202ENST00000393693 RRM2P31350 389 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 ALDH3A2P51648 485 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 RAC1P63000 192 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 NRF1Q16656 503 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 RNF220Q5VTB9 566 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 DEF8Q6ZN54 512 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 EPHX4Q8IUS5 362 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 ROBO4Q8WZ75 1007 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 SLC29A1Q99808 456 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 ARHGDIGQ99819 225 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 QRSL1Q9H0R6 528 aaKnown RBP16.54■□□□□ 0.24
SNCB-202ENST00000393693 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.54■□□□□ 0.24
SNCB-202ENST00000393693 GPR52Q9Y2T5 361 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 ORC6Q9Y5N6 252 aa16.54■□□□□ 0.24
SNCB-202ENST00000393693 A0A087WZY1 265 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 RNF223E7ERA6 249 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 AP3D1O14617 1153 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 EI24O14681 340 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 GADD45GO95257 159 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 UQCRBP14927 111 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 SHC1P29353 583 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 AGTR1P30556 359 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 ATP12AP54707 1039 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 EPS8Q12929 822 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 CLEC12BQ2HXU8 276 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 PLPPR5Q32ZL2 321 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 OTUD3Q5T2D3 398 aaPredicted RBP16.53■□□□□ 0.24
SNCB-202ENST00000393693 HBMQ6B0K9 141 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 ESPNLQ6ZVH7 1005 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 ZNF527Q8NB42 609 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 PIK3C3Q8NEB9 887 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 SPATA3Q8NHX4 192 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 MAGEE2Q8TD90 523 aaPredicted RBP16.53■□□□□ 0.24
SNCB-202ENST00000393693 OSTF1Q92882 214 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 NEUROG1Q92886 237 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 S100PBPQ96BU1 408 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 RDH12Q96NR8 316 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 REPIN1Q9BWE0 567 aaKnown RBP16.53■□□□□ 0.24
SNCB-202ENST00000393693 GABARAPL1Q9H0R8 117 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 PAQR5Q9NXK6 330 aaPredicted RBP16.53■□□□□ 0.24
SNCB-202ENST00000393693 USE1Q9NZ43 259 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 TMCC3Q9ULS5 477 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 LRCH1Q9Y2L9 728 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 U3KQV3 271 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 PRR14LQ5THK1 2151 aa16.53■□□□□ 0.24
SNCB-202ENST00000393693 UGT2B17O75795 530 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 SOD3P08294 240 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 PSMB1P20618 241 aaKnown RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 CDH12P55289 794 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 RGS8P57771 180 aaPredicted RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 RPS4XP62701 263 aaKnown RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 ZNF141Q15928 474 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 RFX4Q33E94 735 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 ZNF836Q6ZNA1 936 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 NUFIP2Q7Z417 695 aaKnown RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 TSEN54Q7Z6J9 526 aaKnown RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 HMGN2P46Q86SG4 172 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 ATG4DQ86TL0 474 aaPredicted RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 RANBP3LQ86VV4 465 aaPredicted RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 CMIPQ8IY22 773 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 ZBTB8AQ96BR9 441 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 ZG16BQ96DA0 208 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 POLR2J2Q9GZM3 115 aaKnown RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 POLR2J3Q9H1A7 115 aaKnown RBP16.52■□□□□ 0.24
SNCB-202ENST00000393693 FANCFQ9NPI8 374 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 GLRX2Q9NS18 164 aa16.52■□□□□ 0.24
SNCB-202ENST00000393693 COL6A5A8TX70 2615 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 C7orf72A4D263 438 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 M0R3H8 397 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 TMCC2O75069 709 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 CDH2P19022 906 aaPredicted RBP16.51■□□□□ 0.23
SNCB-202ENST00000393693 SFTPDP35247 375 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 CDKN1AP38936 164 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 YAP1P46937 504 aaKnown RBP16.51■□□□□ 0.23
SNCB-202ENST00000393693 RNF144AP50876 292 aaPredicted RBP16.51■□□□□ 0.23
SNCB-202ENST00000393693 ZNF41P51814 821 aaPredicted RBP16.51■□□□□ 0.23
SNCB-202ENST00000393693 HMGA2P52926 109 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 RAD23AP54725 363 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 CD226Q15762 336 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 LINC00471Q8N535 108 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 GIPC3Q8TF64 312 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 ABHD3Q8WU67 409 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 SLC35B4Q969S0 331 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 PRRC1Q96M27 445 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 KLHL15Q96M94 604 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 FNDC11Q9BVV2 318 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 SRXN1Q9BYN0 137 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 OR10A4Q9H209 315 aa16.51■□□□□ 0.23
SNCB-202ENST00000393693 SMPD3Q9NY59 655 aaPredicted RBP16.51■□□□□ 0.23
SNCB-202ENST00000393693 VNN3Q9NY84 501 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms